Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1649 86.0 7e-12 seq140 86.0 7e-12 seq1995 84.2 3e-11 >seq1649 Length=69447 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 |||||||| ||||||| || || ||| ||||||||||||||| ||| || || |||||| Sbjct 6679 TAGATATTACTCGTGTACGGTTCGAAGGACTCATTGTTACCCAGGATCTGTGCAGTGGAG 6620 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || ||||| || || || | ||| | | ||| ||| Sbjct 6619 GCCGTTGGCATTGGAGCGATGAGTAGAGAATTGCGTACACCGTGCTTGGCAATCTTCTCC 6560 Query 114062 TTGAGGGCGTCCCAGTC 114078 |||||||| ||||||| Sbjct 6559 TTGAGGGCTGCCCAGTC 6543 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 |||||||| ||||||| || || ||| ||||||||||||||| ||| || || |||||| Sbjct 14975 TAGATATTACTCGTGTACGGTTCGAAGGACTCATTGTTACCCAGGATCTGTGCAGTGGAG 14916 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || ||||| || || || | ||| | | ||| ||| Sbjct 14915 GCCGTTGGCATTGGAGCGATGAGTAGAGAATTGCGTACACCGTGCTTGGCAATCTTCTCC 14856 Query 114062 TTGAGGGCGTCCCAGTC 114078 |||||||| ||||||| Sbjct 14855 TTGAGGGCTGCCCAGTC 14839 >seq140 Length=321507 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 11019 |||||||||||| |||||||| ||||| | ||||| || | || ||||| | | Sbjct 91033 ACCGACGGCGTCGATTTCATCAATGAACAGTATACAGGGGGCGTGTTTCCGGGCCATTGA 91092 Query 11020 AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGC 11079 || || |||| || | || || ||||| |||||||| || | || | || | Sbjct 91093 GAACATGTCTCTCACACGAGAGGGGCCCACACCTACAAACATCTCGAGGAACTCGGACCC 91152 Query 11080 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11139 || | ||||||||||||||||| ||||||||| | || ||| |||||||| || Sbjct 91153 TGATACTGTGATGAAGGGGACGTTGGCTTCACCCGCTGTCGCCTTGGCTAGGAGGGTTTT 91212 Query 11140 CCCCGTCCCAGG 11151 ||||| || || Sbjct 91213 ACCCGTGCCCGG 91224 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 10960 ACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTC 11019 |||||||||||| |||||||| ||||| | ||||| || | || ||||| | | Sbjct 91962 ACCGACGGCGTCGATTTCATCAATGAACAGTATACAGGGGGCGTGTTTCCGGGCCATTGA 92021 Query 11020 AAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGC 11079 || || |||| || | || || ||||| |||||||| || | || | || | Sbjct 92022 GAACATGTCTCTCACACGAGAGGGGCCCACACCTACAAACATCTCGAGGAACTCGGACCC 92081 Query 11080 GGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 11139 || | ||||||||||||||||| ||||||||| | || ||| |||||||| || Sbjct 92082 TGATACTGTGATGAAGGGGACGTTGGCTTCACCCGCTGTCGCCTTGGCTAGGAGGGTTTT 92141 Query 11140 CCCCGTCCCAGG 11151 ||||| || || Sbjct 92142 ACCCGTGCCCGG 92153 >seq1995 Length=54681 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/205 (70%), Gaps = 12/205 (6%) Strand=Plus/Minus Query 10874 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCG 10933 ||||| |||||||| ||| || | |||||| | ||||||||||| |||||| | ||| Sbjct 19659 TCAAAACCATCCATTTCAACTAACATTTGATTTAATGTTTGTTCGCGCTCATCACTTGCG 19600 Query 10934 GG---CATACCAC--CCGCACTG-CGTTGCTTACCGACGGCGTCAATTTCATCGATGAAA 10987 ||||||| || | || || || ||||| | ||||||||||| || ||| Sbjct 19599 CCTCCCATACCAATTCCTCTATGACG--GCCTACCG----CATCAATTTCATCAATAAAA 19546 Query 10988 ACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCG 11047 | ||||| || ||||| ||| || ||| |||||||| || | || || Sbjct 19545 ATAATACAAGGCGCATTTTTTTTAGCATTTTTAAACATATCTCGTACACGAGATGCGCCA 19486 Query 11048 ACACCCACAAACATTTCCACAAAAT 11072 ||||| ||||||||||| ||||||| Sbjct 19485 ACACCAACAAACATTTCAACAAAAT 19461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596144048563040