Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1195 107 2e-18 seq288 104 2e-17 >seq1195 Length=97530 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| ||||| | | | |||||||| || ||||||||||| Sbjct 71885 CCTCCACGAAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71944 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || ||||||||||| | | |||| ||||||||||| || ||||| Sbjct 71945 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGG 72004 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| | || | || | | ||| | |||||| | | |||||| Sbjct 72005 ATTCCCTCCTTGTC-TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCAC 72063 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| |||||| || ||||||||||| Sbjct 72064 ATCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || || || | | | |||||||| || ||||||||||| | || | || Sbjct 71443 CAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 71502 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| | |||||||||| | |||| ||||||||||| || || || || || || ||||| Sbjct 71503 CTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTTGTC 71562 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | ||| | |||||| | | ||||||||| | || | | Sbjct 71563 -TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGG 71621 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||||||| || || || ||||||||||| Sbjct 71622 TCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||| || ||||||||||| | || | || Sbjct 71671 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 71730 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || || |||||||| | | |||| ||||||||||| || ||||| || || || ||||| Sbjct 71731 TTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTC 71790 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | || | |||||| | | ||||||||| | || | | Sbjct 71791 -TTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGG 71849 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||||||| || || || ||||||||||| Sbjct 71850 TCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||| || ||||||||||| | || | || Sbjct 72127 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 72186 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || ||||||||||| | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 72187 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTC 72246 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | ||| | |||||| | | ||||||||| | || | | Sbjct 72247 -TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGG 72305 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || |||||||| || || || ||||| ||||| Sbjct 72306 TCTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | || || || | | | |||||||| || ||||||||||| Sbjct 68599 AGCCTCCACGAAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 68658 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || | || || ||||||||||| | |||| ||||| ||||| || |||| Sbjct 68659 AGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAG 68718 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 | || || || ||||| ||| | || | || | | || | |||||| | | |||| Sbjct 68719 GGATTCCCTCCTTGTC-TTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCC 68777 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| | || | || || |||||||| || || || ||||||||||| Sbjct 68778 ACCTCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 >seq288 Length=257319 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||| || ||||||||||| | || | || Sbjct 247135 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247076 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || ||||||||||| | | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 247075 TTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTTGTC 247016 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | ||| | |||||| | | ||||||||| | || | | Sbjct 247015 -TTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGG 246957 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||||| |||||| ||||| |||||||| Sbjct 246956 TCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 246923 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||| || ||||||||||| | || | || Sbjct 247363 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 247304 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || ||||||||||| | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 247303 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247244 Query 138522 GGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | ||| | |||||||| | ||||||||| | || | | Sbjct 247243 T-TGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGATGG 247185 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||||| |||||| || ||||||||||| Sbjct 247184 TCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| || ||||||||||| | || | || || ||||||||||| | | || Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTG 138542 || ||||||||||| || ||||| || || || ||||| ||| | || | || | | Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTC-TTGAATCTTAGCCTTGACGTT 257201 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 ||| | |||||| | | ||||||||| | || | || || ||||||| |||||| || Sbjct 257200 TTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGAC 257141 Query 138603 AAAAATCTGCAT 138614 ||||||||||| Sbjct 257140 GAAAATCTGCAT 257129 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || ||||| | | | |||||||| || ||||||||||| | || | || Sbjct 247591 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247532 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 || ||||||||||| | |||| ||||| ||||| || ||||| || || || ||||| Sbjct 247531 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247472 Query 138522 GGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | ||| | |||||| | | |||||| || | || | | Sbjct 247471 T-TGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGG 247413 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||||| |||||| || ||||||||||| Sbjct 247412 TCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495257543079360