Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq686 114 1e-20 seq288 107 2e-18 seq1195 104 2e-17 >seq686 Length=151467 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 126924 CTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGA 126983 |||||||||||||||| || || || | ||| || | |||||| || || ||| Sbjct 39213 CTTTTTGAATATTGTAGTCTGACAGAGTTCTTCCATCTTCCAACTGTTTGCCGGCAAAGA 39272 Query 126984 TCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTT 127043 |||||| ||| ||||||||||| || || ||||||||| |||||| |||| | | Sbjct 39273 TCAATCTCTGTTGATCGGGAGGGATACCTTCCTTGTCCTGGATTTTGGCTTTGACATTCT 39332 Query 127044 CGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 127103 ||| |||||| | |||||| || | ||| | || || || |||| |||||| |||| Sbjct 39333 CGATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTCCCTGTCAAAGTTTTGACAA 39392 Query 127104 AAATCTGCATG 127114 | ||||||||| Sbjct 39393 AGATCTGCATG 39403 >seq288 Length=257319 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || ||| |||||||| | || ||||| || || || ||||| || Sbjct 247377 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247318 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || || ||||| |||||| |||||| || || ||||| ||||| Sbjct 247317 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 247258 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | ||||| |||||| | | ||| || Sbjct 247257 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACC 247198 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| |||||| || ||||||||||| Sbjct 247197 TCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || ||| |||||||| | || ||||| || || || ||||| || Sbjct 247149 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247090 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || ||||| ||||| |||||| || || ||||||||||| Sbjct 247089 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGG 247030 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | ||| | |||||| | | ||| || Sbjct 247029 ATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACC 246970 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| |||| |||||| ||||| |||||||| Sbjct 246969 TCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 246923 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || ||| |||||||| | || ||||| || || || ||||| || Sbjct 247605 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 247546 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || ||||| |||||| |||||| || || ||||| ||||| Sbjct 247545 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 247486 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| || || ||||| | ||||| |||||| | | ||| || Sbjct 247485 ATTCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACA 247426 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| |||||| || ||||||||||| Sbjct 247425 TCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || || ||||| ||||| |||||| ||||| ||||||||||| || |||||||| Sbjct 257284 ATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTT 257225 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| | ||| | |||||| | | ||| || || | || | Sbjct 257224 GTCTTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 257165 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| |||| |||||| || ||||||||||| Sbjct 257164 GGTCTTGCCAGTCAAAGTTTTGACGAAAATCTGCAT 257129 >seq1195 Length=97530 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || ||| |||||||| | || ||||| || || || ||||| || Sbjct 71657 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71716 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || || ||||| ||||| |||||| ||||| ||||||||||| Sbjct 71717 AGGGTTCTACCATCTTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGG 71776 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| || || ||||| | || | |||||| | | ||| || Sbjct 71777 ATGCCCTCCTTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACC 71836 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || ||||||||||| Sbjct 71837 TCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || || || | || ||| |||||||| | || ||||| || || || ||||| || Sbjct 72113 CCTCCACGAAGTCTCAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 72172 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || || ||||| |||||| |||||| || || ||||| ||||| Sbjct 72173 AGGGTTCTTCCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGG 72232 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| || || ||||| | ||||| |||||| | | ||| || Sbjct 72233 ATGCCCTCCTTGTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACC 72292 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| ||||| || || || ||||| ||||| Sbjct 72293 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || ||||| || || || ||||| || | || | | ||| || Sbjct 71903 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 71962 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| ||||| |||||| ||||| ||||| ||||| || ||||||||||| Sbjct 71963 AGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGGATTCCCTCCTTGTCTTGA 72022 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | ||||| |||||| | | ||| || || | || | || || Sbjct 72023 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGTCTTT 72082 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| |||||| || ||||||||||| Sbjct 72083 CCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 || ||| ||||| || | || ||||| || || || ||||| || | || | Sbjct 71440 TCTCAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCC 71499 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || | |||||| || || |||||| ||||| |||||||| || || |||||||| Sbjct 71500 ATCCTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTT 71559 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 ||| || || ||||| | ||||| |||||| | | ||| || || | || | Sbjct 71560 GTCTTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGAT 71619 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| ||||| || || || ||||||||||| Sbjct 71620 GGTCTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| || || || ||||| || | || | | ||| || Sbjct 68618 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTC 68677 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || ||||| |||||| |||||| || || ||||| ||||| || ||||||||||| Sbjct 68678 CAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCTTG 68737 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||||| | || | |||||| | | ||| || || | || | || || Sbjct 68738 AATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTT 68797 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || ||||||||||| Sbjct 68798 TCCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474537982205120