Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1995 86.0 8e-12 seq1649 82.4 9e-11 >seq1995 Length=54681 Score = 86.0 bits (94), Expect = 8e-12 Identities = 279/426 (65%), Gaps = 8/426 (2%) Strand=Plus/Minus Query 15828 TGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGA 15887 ||||||| || || | |||||||| |||| | || | | | ||| | | | | Sbjct 19803 TGAACACATAAAATTTGTTCGCGTCCTCGAATATCAGGTAAACCAACTACAACTTGCCTA 19744 Query 15888 TCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCG 15947 || || || ||||| | | | || | |||||| | ||| | | ||| ||||| || Sbjct 19743 TCTAAACGTCCTGGTCTTAATAAAGCTTTATCAAGTACATCTGCTCTATTAGTTGCTGCA 19684 Query 15948 ATGACAACAATACCTGT-TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAAT 16006 || || | | || | || | | |||||||||||||| || || | || || | Sbjct 19683 ATAACTATCACCCCAGAATTAGCT-TCAAAACCATCCATTTCAACTAACATTTGATTTAA 19625 Query 16007 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACG 16064 |||||||| || |||||| | || || | ||| ||| | | || || || Sbjct 19624 TGTTTGTTCGCGCTCATCACTTGC--GCCTCCCATACCAATTCCTCTATGACGGCCTACC 19567 Query 16065 GCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGA 16124 |||||||| |||||||| || | || || || ||||| ||| || ||| | | Sbjct 19566 GCATCAATTTCATCAATAAAAATAATACAAGGCGCATTTTTTTTAGCATTTTTAAACATA 19507 Query 16125 TCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACA 16183 || |||||||| ||||| |||||||||||||| || ||||| | || | || | | Sbjct 19506 TCTCGTACACGAGATGCGCCAACACCAACAAACATTTCAACAAAATCTGAACCTGATATA 19447 Query 16184 TTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGT 16243 | | || || || |||| ||||| || || || ||||| | | ||| ||||| || Sbjct 19446 GT-AAAAAACGGTACTTTAGCCTCACCAGCGATTGCACGGGCTAATAAAGTTTTACCAGT 19388 Query 16244 ACCTGG 16249 |||||| Sbjct 19387 ACCTGG 19382 >seq1649 Length=69447 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 || || ||||||||||| |||||||| ||||| ||| ||||||| ||||| | ||| ||| Sbjct 6600 ATCGCTCCAATGCCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAA 6659 Query 112968 CCCTACACGACGAACATCTA 112987 || ||||||| || ||||| Sbjct 6660 CCGTACACGAGTAATATCTA 6679 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 112908 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 112967 || || ||||||||||| |||||||| ||||| ||| ||||||| ||||| | ||| ||| Sbjct 14896 ATCGCTCCAATGCCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAA 14955 Query 112968 CCCTACACGACGAACATCTA 112987 || ||||||| || ||||| Sbjct 14956 CCGTACACGAGTAATATCTA 14975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619485489751360