Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq3282 84.2 3e-11 seq1728 84.2 3e-11 >seq3282 Length=20056 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 113819 TGGGGGATTAGCTCAGTTGGAATGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGA 113878 |||||| ||||||||||||| | |||| ||| ||||||| ||| | ||||||||||| | Sbjct 2437 TGGGGGTTTAGCTCAGTTGGTA-GAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAA 2379 Query 113879 CCCCGATATCCTCCACCA-ATTTTA 113902 |||||| ||||||||| |||||| Sbjct 2378 TTCCGATAACCTCCACCACATTTTA 2354 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 113819 TGGGGGATTAGCTCAGTTGGAATGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGA 113878 |||||| ||||||||||||| | |||| ||| ||||||| ||| | ||||||||||| | Sbjct 9817 TGGGGGTTTAGCTCAGTTGGTA-GAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAA 9759 Query 113879 CCCCGATATCCTCCACCA-ATTTTA 113902 |||||| ||||||||| |||||| Sbjct 9758 TTCCGATAACCTCCACCACATTTTA 9734 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 113819 TGGGGGATTAGCTCAGTTGGAATGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGA 113878 |||||| ||||||||||||| | |||| ||| ||||||| ||| | ||||||||||| | Sbjct 16863 TGGGGGTTTAGCTCAGTTGGTA-GAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAA 16805 Query 113879 CCCCGATATCCTCCACCA-ATTTTA 113902 |||||| ||||||||| |||||| Sbjct 16804 TTCCGATAACCTCCACCACATTTTA 16780 >seq1728 Length=64960 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 113819 TGGGGGATTAGCTCAGTTGGAATGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGA 113878 |||||| ||||||||||||| | |||| ||| ||||||| ||| | ||||||||||| | Sbjct 43734 TGGGGGTTTAGCTCAGTTGGTA-GAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAA 43676 Query 113879 CCCCGATATCCTCCACCA-ATTTTA 113902 |||||| ||||||||| |||||| Sbjct 43675 TTCCGATAACCTCCACCACATTTTA 43651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751080888170720