Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq204 105 8e-18 >seq204 Length=278841 Score = 105 bits (116), Expect = 8e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18980 GTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttt 19039 || |||| ||||| |||| ||||||| ||||||| |||||||| || || | || Sbjct 80671 GTACCTCATCTCTTGAGATCAGTTCATTACTGAATGTTAGTCCAGGCATGAGGCCGCGTT 80612 Query 19040 tttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAA 19099 | || | |||||| ||||| ||||| || || ||||| || || ||||| || | Sbjct 80611 TCTTAAGCCAGAAGATAGATGCAAAGCTCCCGGAGAAGAAGATTCCCTCTACACTGGCGA 80552 Query 19100 AAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAAT 19159 | || | | ||| |||||| | || | | || |||||| || ||||| | Sbjct 80551 ATGCTATAACTCTCTCTCCAAATGAAGACGCTTCATCTGCAATCCAGCGTAGCGCCCAGT 80492 Query 19160 CAGCCTTCTTTTTTACACATGGCATTGTCTCTATAG 19195 | |||||||| |||||||||||||||||||| |||| Sbjct 80491 CTGCCTTCTTCTTTACACATGGCATTGTCTCAATAG 80456 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509 ||||| | ||||||||| || | ||||| || || ||||||||||| |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATA 19569 || ||||| ||||||| ||||| || || ||||| | | | ||| ||| | || | | Sbjct 77799 CAGATATCCTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATTATCTCTCAGGAGA 77740 Query 19570 GGTTC 19574 ||||| Sbjct 77739 GGTTC 77735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560970613996320