Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1195 120 2e-22 seq288 114 1e-20 seq1584 93.3 3e-14 seq612 93.3 3e-14 seq78 86.0 5e-12 >seq1195 Length=97530 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| ||| || || || ||||| ||||| || ||| | | || ||| Sbjct 71903 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 71962 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | || ||||| ||||| ||||| ||||||||||| | || | ||||||||||| | Sbjct 71963 AGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGGATTCCCTCCTTGTCTTGA 72022 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | ||||| | |||||| |||| || || || ||| Sbjct 72023 ATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGTCTTT 72082 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||||||||| || ||||||||||| Sbjct 72083 CCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | | || Sbjct 71671 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 71730 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||| ||||| ||||| ||||||||||| | || | |||||||||||| Sbjct 71731 TTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTC 71790 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || ||| | | | || || | ||||||||||| || || || Sbjct 71791 TTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71850 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||| || || || ||||||||||| Sbjct 71851 CTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| ||||| || || ||| ||| || || || ||||| ||||| || ||| | || Sbjct 71443 CAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 71502 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| ||||||||||| ||||| ||||||||||| | || | ||||||||||| Sbjct 71503 CTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTTGTC 71562 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | | || || | ||||||||||| || || || Sbjct 71563 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71622 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||| || || || ||||||||||| Sbjct 71623 CTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || ||| ||| || || || ||||| ||||| || ||| | Sbjct 68610 AGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTA 68669 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| || ||||| || || ||||| || |||||||| | || | |||||| Sbjct 68670 CCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCC 68729 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || || | ||||||||||| || Sbjct 68730 TTGTCTTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTG 68789 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||| || || || ||||||||||| Sbjct 68790 ATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | || Sbjct 72127 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 72186 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||| || || ||||| || |||||||| | || | |||||||||||| Sbjct 72187 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTC 72246 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | | || || | ||||||||||| || || || Sbjct 72247 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 72306 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || |||| || || || ||||| ||||| Sbjct 72307 CTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 >seq288 Length=257319 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | | || Sbjct 247363 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 247304 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||| || || ||||| || |||||||| | || | ||||||||||| Sbjct 247303 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247244 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | | || || | ||||||||||| || || || Sbjct 247243 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGATGGT 247184 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||||||||| || ||||||||||| Sbjct 247183 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 111 bits (122), Expect = 1e-19 Identities = 153/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | || Sbjct 247135 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247076 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||| ||||| ||||| || |||||||| | || | ||||||||||| Sbjct 247075 TTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTTGTC 247016 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | | || || | ||||||||||| || || || Sbjct 247015 TTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 246956 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||||||||| ||||| ||||||||| Sbjct 246955 CTTGCCAGTCAAAGTTTTGACAAAGATCTGCATC 246922 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | || Sbjct 247591 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247532 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||| || ||||| || || ||||| || |||||||| | || | ||||||||||| Sbjct 247531 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247472 Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733 |||||| || || | | | ||||| | |||||| |||| || || || Sbjct 247471 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGT 247412 Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| ||||||||||| || ||||||||||| Sbjct 247411 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Score = 102 bits (112), Expect = 6e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || ||||| ||||| || ||| | | || |||| || ||||| ||||| Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||| ||||||||||| | || | ||||||||||| |||||| || || Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTT 257200 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||||||||||| || || || || || ||||||||||| || Sbjct 257199 TCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 257140 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 257139 AAAATCTGCAT 257129 >seq1584 Length=71887 Score = 93.3 bits (102), Expect = 3e-14 Identities = 167/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 8990 ATTAATTAGTACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCAGTCGTGGAAG 9049 |||| || ||||| || || ||||||||||| |||| || | |||| | || | Sbjct 30654 ATTACTTGGTACCTGTAGAACCAAACCCTCCAGCTCCCCGTTCTGTGTTATTCAAATTGG 30713 Query 9050 TAACCTCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCC 9109 |||| || || || || || | | ||| || | ||| ||||| | ||| | Sbjct 30714 TAACTTCCTGAAGGACAGGGTATTCAATACGCTGACAGATAAGTTGGGCAATACGGTCAC 30773 Query 9110 CCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCC 9169 | || ||||| |||||| || |||||||||||||| || || || || || || | Sbjct 30774 CTTTGTTCACTTTGAAGTCTTGATCAGAATGATTGAACAGAACTACACCTACATTGCCTC 30833 Query 9170 TGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAG 9229 |||||| ||||| || ||||||||||| || || ||| | ||| ||||| |||| Sbjct 30834 GGTAATCTTCATCAATGACACCAGCACCAACATCAATGTGATTCTTCCATGCTAGACCAG 30893 Query 9230 AGCG 9233 |||| Sbjct 30894 AGCG 30897 >seq612 Length=165075 Score = 93.3 bits (102), Expect = 3e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613 ||| |||||||| || ||| ||| || || || ||||| ||||| || ||| | || Sbjct 62093 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 62034 Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 |||||||| ||||| ||||| ||||| || |||||||| | || | |||||||||||| Sbjct 62033 TTCCAACTGTTTACCAGCAAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTC 61974 Query 48674 GCTAATCTT 48682 |||||| Sbjct 61973 TTGAATCTT 61965 >seq78 Length=379166 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || |||| ||||| || || || ||||| || || ||||||||||| Sbjct 70374 CCTCCTCTCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGAC 70433 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| ||||||||||| || || || || || || || || || | || Sbjct 70434 AAGGTACGTCCGTCTTCCAACTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGAGGG 70493 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || ||||| || ||||| || ||| | | || || || | || ||| Sbjct 70494 ATACCTTCCTTATCTTGGATCTTAGCCTTCACATTTTCAATAGTGTCAGAGGGTTCAACC 70553 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || ||||| ||||| ||||| |||||||| Sbjct 70554 TCCAAGGTGATGGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 70600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380185542038124