Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq25611 131 4e-25 seq1112 131 4e-25 seq1728 98.7 2e-15 seq1337 98.7 2e-15 >seq25611 Length=761 Score = 131 bits (144), Expect = 4e-25 Identities = 202/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 133907 AAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAACTAGAT 133966 |||| | ||||| ||||||| | |||| | | || ||||||||| || | || Sbjct 345 AAAACTGATCCTAATTCTCGTAGAATTATTGTTTCAGCCTGGAATGTTTCCGATATTCAT 404 Query 133967 AAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTA---AATGACGGTAAG 134023 ||||||| || || || |||||| || |||||| | |||| ||| | ||| Sbjct 405 AAAATGAAATTACCTCCTTGTCATATATTATTTCAATTTTACGTAGCAAATAA---TAAA 461 Query 134024 TTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAACATT 134083 ||||| ||| ||||||||||||| ||| | || |||||| ||||||| || ||| Sbjct 462 TTATCTTGTCAATTATATCAACGTAGTGCGGATATTTTTTTAGGATTACCATTTAATATT 521 Query 134084 GCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAGTTGGTGAG 134143 ||||||||||| ||| ||| |||||| ||||||| | || ||| | |||||||| Sbjct 522 GCTTCATATTCGTTATTAATTCATATAATAGCACACGAAACAGGATTAAAGGTTGGTGAT 581 Query 134144 TTTGTATGGATGGGTGGAGATGTTCACATTTATAAAAATCACGTAGA 134190 ||| |||||| || || ||| ||| | ||| |||||| |||| Sbjct 582 TTTATATGGACTGGAGGTGATTGTCATTTATATTTAAATCATTTAGA 628 >seq1112 Length=102550 Score = 131 bits (144), Expect = 4e-25 Identities = 202/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 133907 AAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAACTAGAT 133966 |||| | ||||| ||||||| | |||| | | || ||||||||| || | || Sbjct 24773 AAAACTGATCCTAATTCTCGTAGAATTATTGTTTCAGCCTGGAATGTTTCCGATATTCAT 24714 Query 133967 AAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTA---AATGACGGTAAG 134023 ||||||| || || || |||||| || |||||| | |||| ||| | ||| Sbjct 24713 AAAATGAAATTACCTCCTTGTCATATATTATTTCAATTTTACGTAGCAAATAA---TAAA 24657 Query 134024 TTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAACATT 134083 ||||| ||| ||||||||||||| ||| | || |||||| ||||||| || ||| Sbjct 24656 TTATCTTGTCAATTATATCAACGTAGTGCGGATATTTTTTTAGGATTACCATTTAATATT 24597 Query 134084 GCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAGTTGGTGAG 134143 ||||||||||| ||| ||| |||||| ||||||| | || ||| | |||||||| Sbjct 24596 GCTTCATATTCGTTATTAATTCATATAATAGCACACGAAACAGGATTAAAGGTTGGTGAT 24537 Query 134144 TTTGTATGGATGGGTGGAGATGTTCACATTTATAAAAATCACGTAGA 134190 ||| |||||| || || ||| ||| | ||| |||||| |||| Sbjct 24536 TTTATATGGACTGGAGGTGATTGTCATTTATATTTAAATCATTTAGA 24490 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 134054 GATCTATTCTTAGGAGTACCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTA 134113 ||| | || |||||| ||||||| || |||||||||||||| ||| ||| |||||| || Sbjct 31636 GATATTTTTTTAGGATTACCATTTAATATTGCTTCATATTCGTTATTAATTCATATAATA 31577 Query 134114 GCACAAGTTTGTGGGTTAGAAGTTGGTGAGTTTGTATGGATGGGTGGAGATGTTCACATT 134173 ||||| | || ||| | |||||||| ||| |||||| || || ||| ||| | Sbjct 31576 GCACACGAAACAGGATTAAAGGTTGGTGATTTTATATGGACTGGAGGTGATTGTCATTTA 31517 Query 134174 TATAAAAATCACGTAGA 134190 ||| |||||| |||| Sbjct 31516 TATTTAAATCATTTAGA 31500 >seq1728 Length=64960 Score = 98.7 bits (108), Expect = 2e-15 Identities = 266/398 (67%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 150398 TTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATC 150457 ||| | || ||||| || || ||||||||| || || || |||||||| ||||| || Sbjct 3977 TTAATCGGAGAACCTGGAGTAGGTAAAACAGCTATTGTAGAGGGATTAGCTCAACGAATT 3918 Query 150458 GCTAATGGTGATGTTCC----AGATTCT-ATGAAAGATGTTGAAATTCTTTCTTTGAATA 150512 ||||| || || || || || | || ||| | ||||| | | | ||| Sbjct 3917 ATAAATGGAGAAGTCCCTAATAGTTTGTTATCAAAAA-----AAATTTTATTACTAGATA 3863 Query 150513 TGGGTGCATTTACT-GCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAAT 150571 | | | ||| ||| ||||| || || |||||||| ||||| ||||| || || | || Sbjct 3862 TAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAA 3804 Query 150572 TTGCTACAAGAACTAA--AAGAA-CGCGATGATGTTATTCTGTTCATCGATGAAATCCAT 150628 | || ||||| || || || | | ||| |||| | || || |||||| | ||| Sbjct 3803 ATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACAT 3744 Query 150629 ACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAA 150688 ||||| || || | ||| | | | || | ||| | ||| | |||||| | ||| Sbjct 3743 ACTATGATTGGAACAGGTAA-AGTAGAGG--GCTCTATAGATGCTGGTAATATGCTGAAA 3687 Query 150689 CCTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGT 150748 || | ||||||| || ||| ||| | || || || || || ||||||||||| Sbjct 3686 CCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGT 3627 Query 150749 AAACACATTGAAAAAGATGCAGCACTACAGCGTCGTTT 150786 || | || ||||||||||||||| | |||| ||||| Sbjct 3626 CAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTT 3589 Score = 98.7 bits (108), Expect = 2e-15 Identities = 266/398 (67%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 150398 TTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATC 150457 ||| | || ||||| || || ||||||||| || || || |||||||| ||||| || Sbjct 10684 TTAATCGGAGAACCTGGAGTAGGTAAAACAGCTATTGTAGAGGGATTAGCTCAACGAATT 10625 Query 150458 GCTAATGGTGATGTTCC----AGATTCT-ATGAAAGATGTTGAAATTCTTTCTTTGAATA 150512 ||||| || || || || || | || ||| | ||||| | | | ||| Sbjct 10624 ATAAATGGAGAAGTCCCTAATAGTTTGTTATCAAAAA-----AAATTTTATTACTAGATA 10570 Query 150513 TGGGTGCATTTACT-GCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAAT 150571 | | | ||| ||| ||||| || || |||||||| ||||| ||||| || || | || Sbjct 10569 TAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAA 10511 Query 150572 TTGCTACAAGAACTAA--AAGAA-CGCGATGATGTTATTCTGTTCATCGATGAAATCCAT 150628 | || ||||| || || || | | ||| |||| | || || |||||| | ||| Sbjct 10510 ATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACAT 10451 Query 150629 ACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAA 150688 ||||| || || | ||| | | | || | ||| | ||| | |||||| | ||| Sbjct 10450 ACTATGATTGGAACAGGTAA-AGTAGAGG--GCTCTATAGATGCTGGTAATATGCTGAAA 10394 Query 150689 CCTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGT 150748 || | ||||||| || ||| ||| | || || || || || ||||||||||| Sbjct 10393 CCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGT 10334 Query 150749 AAACACATTGAAAAAGATGCAGCACTACAGCGTCGTTT 150786 || | || ||||||||||||||| | |||| ||||| Sbjct 10333 CAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTT 10296 >seq1337 Length=71271 Score = 98.7 bits (108), Expect = 2e-15 Identities = 266/398 (67%), Gaps = 18/398 (5%) Strand=Plus/Minus Query 150398 TTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATC 150457 ||| | || ||||| || || ||||||||| || || || |||||||| ||||| || Sbjct 70091 TTAATCGGAGAACCTGGAGTAGGTAAAACAGCTATTGTAGAGGGATTAGCTCAACGAATT 70032 Query 150458 GCTAATGGTGATGTTCC----AGATTCT-ATGAAAGATGTTGAAATTCTTTCTTTGAATA 150512 ||||| || || || || || | || ||| | ||||| | | | ||| Sbjct 70031 ATAAATGGAGAAGTCCCTAATAGTTTGTTATCAAAAA-----AAATTTTATTACTAGATA 69977 Query 150513 TGGGTGCATTTACT-GCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAAT 150571 | | | ||| ||| ||||| || || |||||||| ||||| ||||| || || | || Sbjct 69976 TAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAA 69918 Query 150572 TTGCTACAAGAACTAA--AAGAA-CGCGATGATGTTATTCTGTTCATCGATGAAATCCAT 150628 | || ||||| || || || | | ||| |||| | || || |||||| | ||| Sbjct 69917 ATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACAT 69858 Query 150629 ACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAA 150688 ||||| || || | ||| | | | || | ||| | ||| | |||||| | ||| Sbjct 69857 ACTATGATTGGAACAGGTAA-AGTAGAGG--GCTCTATAGATGCTGGTAATATGCTGAAA 69801 Query 150689 CCTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGT 150748 || | ||||||| || ||| ||| | || || || || || ||||||||||| Sbjct 69800 CCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGT 69741 Query 150749 AAACACATTGAAAAAGATGCAGCACTACAGCGTCGTTT 150786 || | || ||||||||||||||| | |||| ||||| Sbjct 69740 CAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTT 69703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1145208609118024