Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq2595 100 5e-16 seq204 98.7 2e-15 seq1649 84.2 4e-11 >seq2595 Length=46188 Score = 100 bits (110), Expect = 5e-16 Identities = 110/145 (76%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||| | ||||| ||| ||||| |||||||||||| ||||||||| |||||| Sbjct 29333 CTTGAGAATTTTCACGCGCTCTTCCAGGTTCGCGATGCGTTCGAGTTTGCGCTTGCGGCA 29392 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 ||||| ||||| | ||||||||| | | ||| ||||| |||||||| || || Sbjct 29393 TTTGGACGCTGCGACGCGGTTCCGTTGCCGCTTGCGTTCGATTTTGATGCGCTCTTGCGA 29452 Query 241609 CTCCATGTCGATCGGAGAC-TTGGG 241632 ||||||||||| || ||| ||||| Sbjct 29453 TTCCATGTCGATGGGGGACATTGGG 29477 >seq204 Length=278841 Score = 98.7 bits (108), Expect = 2e-15 Identities = 132/179 (74%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 48188 AGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAG 48247 || |||||||||| || | | || |||||||| || | || || || |||||| Sbjct 80633 AGTCCAGGCATGAGGCCGCGTTTCTTAAGCCAGAAGATAGATGCAAAGCTCCCGGAGAAG 80574 Query 48248 AAGATGCCCTC--CACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG-CGTTCTTG 48304 ||||| ||||| ||||| ||||| || | | |||||||| || |||| || | | Sbjct 80573 AAGATTCCCTCTACACTG--GCGAATGCTATAACTCTCTCTCCAAATGAAGACGCT-TCA 80517 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTAT 48363 |||| |||||| ||||||||||||||||||||||| | |||||||| ||||| || Sbjct 80516 TCTGCAATCCAGCGTAGCGCCCAGTCTGCCTTCTTCTTTACACATGGCATTGTCTCAAT 80458 >seq1649 Length=69447 Score = 84.2 bits (92), Expect = 4e-11 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-ACTC-TCTGCATGAACAGGTCCGGG 213836 ||| ||||| || ||||| | | ||| |||| || | ||| |||||| |||||| Sbjct 2591 GGGGCACATCAGACTCCACTGAGCATCA-CTCTCCACGCGTCT-CATGAATTCGTCCGGT 2534 Query 213837 ACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGC 213896 | |||||| || ||||||||||| | | ||| ||| || | ||| || Sbjct 2533 ATCCACAGGCCGTAGAACAGGTCCCGCGCGCGGAACTCTTCCTTGCCGGTGTTCTTCTTG 2474 Query 213897 AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 || || || ||||| || ||||| ||||||||||||||| |||||||| || |||||| Sbjct 2473 AGCTCGAGGAAGTCGAAAATGTCGCCGTGCCACGGCTCCAGATAGATGGCGAAAGCGCCC 2414 Query 213957 GGCCTCT 213963 ||||||| Sbjct 2413 GGCCTCT 2407 Score = 84.2 bits (92), Expect = 4e-11 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 213779 GGGACACATGAGGCTCCAGTCCCCGTCATCTCTG-ACTC-TCTGCATGAACAGGTCCGGG 213836 ||| ||||| || ||||| | | ||| |||| || | ||| |||||| |||||| Sbjct 3814 GGGGCACATCAGACTCCACTGAGCATCA-CTCTCCACGCGTCT-CATGAATTCGTCCGGT 3757 Query 213837 ACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGC 213896 | |||||| || ||||||||||| | | ||| ||| || | ||| || Sbjct 3756 ATCCACAGGCCGTAGAACAGGTCCCGCGCGCGGAACTCTTCCTTGCCGGTGTTCTTCTTG 3697 Query 213897 AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCC 213956 || || || ||||| || ||||| ||||||||||||||| |||||||| || |||||| Sbjct 3696 AGCTCGAGGAAGTCGAAAATGTCGCCGTGCCACGGCTCCAGATAGATGGCGAAAGCGCCC 3637 Query 213957 GGCCTCT 213963 ||||||| Sbjct 3636 GGCCTCT 3630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929646585809920