Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq3282 93.3 5e-14 seq1728 93.3 5e-14 >seq3282 Length=20056 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | Sbjct 2437 TGGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAAT 2378 Query 9832 TCCGCTATTCTCCA 9845 |||| || ||||| Sbjct 2377 TCCGATAACCTCCA 2364 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | Sbjct 9817 TGGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAAT 9758 Query 9832 TCCGCTATTCTCCA 9845 |||| || ||||| Sbjct 9757 TCCGATAACCTCCA 9744 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | Sbjct 16863 TGGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAAT 16804 Query 9832 TCCGCTATTCTCCA 9845 |||| || ||||| Sbjct 16803 TCCGATAACCTCCA 16790 >seq1728 Length=64960 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831 ||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| | Sbjct 43734 TGGGGGTTTAGCTCAGTTGGTAGAGCACCTGCTTTGCAAGCAGGATGTCATCGGTTCAAT 43675 Query 9832 TCCGCTATTCTCCA 9845 |||| || ||||| Sbjct 43674 TCCGATAACCTCCA 43661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548509497083360