Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq3053 93.3 7e-14 seq686 84.2 3e-11 >seq3053 Length=52643 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | ||||| | || |||||||| || || | || || |||| | Sbjct 11920 TGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTCTG 11979 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||| || ||| ||| || ||| || ||||| || || || || || | Sbjct 11980 ACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAGC 12039 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | |||||||| || || || ||||| || ||| | || || | ||||| || | Sbjct 12040 AACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAACA 12099 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 12100 TCCAGAAAGAATCTAC 12115 Score = 93.3 bits (102), Expect = 7e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | ||||| | || |||||||| || || | || || |||| | Sbjct 35580 TGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTCTG 35639 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||| || ||| ||| || ||| || ||||| || || || || || | Sbjct 35640 ACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAGC 35699 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | |||||||| || || || ||||| || ||| | || || | ||||| || | Sbjct 35700 AACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAACA 35759 Query 146212 TACAAAAAGAATCGAC 146227 | || |||||||| || Sbjct 35760 TCCAGAAAGAATCTAC 35775 >seq686 Length=151467 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || ||||| || || || || |||| || || | | | Sbjct 39401 TGCAGATCTTTGTCAAAACTTTGACAGGGAAGACCATCACCCTTGAGGTCGAGCCCAGTG 39342 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| ||| ||||| || || ||||| || || |||||||||| Sbjct 39341 ACACCATCGAGAATGTCAAAGCCAAAATCCAGGACAAGGAAGGTATCCCTCCCGATCAAC 39282 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| || ||||| || || ||| ||||| | |||| || |||| Sbjct 39281 AGAGATTGATCTTTGCCGGCAAACAGTTGGAAGATGGAAGAACTCTGTCAGACTACAATA 39222 Query 146212 TACAAAAAG 146220 | ||||||| Sbjct 39221 TTCAAAAAG 39213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784574530964960