Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq288 134 1e-26 seq78 132 4e-26 seq1195 125 5e-24 seq612 84.2 2e-11 >seq288 Length=257319 Score = 134 bits (148), Expect = 1e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | ||| || Sbjct 247131 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCTTCC 247072 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| |||||| | |||| | ||| ||||| || || || ||||| |||||||| Sbjct 247071 AGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTTGTCTTG- 247013 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||| |||| | ||||||||| | || || || | ||| || || || Sbjct 247012 AATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTT 246953 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 |||||| || ||||| ||||| |||||||| || Sbjct 246952 GCCAGTCAAAGTTTTGACAAAGATCTGCATCTT 246920 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | | ||| || Sbjct 247359 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 247300 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| ||||| | |||| | ||| ||||| || || || ||||| |||||||| Sbjct 247299 AGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCTTG- 247241 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||| |||| | ||||| ||| | || || || | ||| || || || Sbjct 247240 AATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGATGGTCTT 247181 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || || |||||||| Sbjct 247180 TCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | ||| || Sbjct 247587 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCTTCC 247528 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| ||||| | |||| | ||| ||||| || || || ||||| |||||||| Sbjct 247527 AGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCTTG- 247469 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||| |||| | ||||| ||| | || || || | ||| || || || Sbjct 247468 AATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGTCTT 247409 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| || || |||||||| Sbjct 247408 TCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 >seq78 Length=379166 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| |||| |||||| ||||| ||||| || |||||||| || ||||| ||||| | Sbjct 70373 TCCTCCTCTCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGA 70432 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||| || || || | || || ||||| | || | | |||||| || || || Sbjct 70433 CAAGGTACGTCCGTCTTCCAACTGCTTTCCAGCGAAAATGAGACGTTGCTGGTCAGGAGG 70492 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||| || || ||||| | || || ||| |||| | ||||||||| |||| || Sbjct 70493 GATACCTTCCTTATCTTGGATCTTAGCCTTCACATTTTCAATAGTGTCAGAGGGTTCAAC 70552 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || ||||||||||| || ||||| ||||| |||||||| Sbjct 70553 CTCCAAGGTGATGGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 70600 >seq1195 Length=97530 Score = 125 bits (138), Expect = 5e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | | ||| || ||||||||||| ||||| || || || ||||| || || | Sbjct 71885 CCTCCACGAAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71944 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | ||| || |||||||| |||||| | |||| | || ||||| || || Sbjct 71945 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGG 72004 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| |||||||| ||| || | ||||| |||| | ||||| ||| | || || Sbjct 72005 ATTCCCTCCTTGTCTTG-AATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCAC 72063 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || || || ||||| || ||||| || || |||||||| Sbjct 72064 ATCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | | ||| || Sbjct 71675 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 71734 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 || ||||| |||||| | |||| | || ||||| || || || ||||| |||||||| Sbjct 71735 AGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCTTG- 71793 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | |||||| | || | ||||||||| | || || || | ||| || || || Sbjct 71794 AATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTT 71853 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | ||| || || || |||||||| Sbjct 71854 TCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | ||| || Sbjct 72131 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCTTCC 72190 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 |||||||| ||||| | |||| | ||| ||||| || || || ||||| |||||||| Sbjct 72191 AGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTCTTG- 72249 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 ||| || | ||||| |||| | ||||||||| | || || || | ||| || || || Sbjct 72250 AATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTT 72309 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||||| | ||| || || || || ||||| Sbjct 72310 GCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 >seq612 Length=165075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637 ||||||||||| ||||| || || || ||||| || || | | ||| | ||| || Sbjct 62089 ACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCTTCC 62030 Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697 | ||||| |||||| | |||| | ||| ||||| || || || ||||| |||||||| Sbjct 62029 AACTGTTTACCAGCAAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTCTTG- 61971 Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741 ||| || | |||||| | || | ||||||||| | || || || Sbjct 61970 AATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTC 61926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384458689180308