Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1995 358 2e-93 seq1728 141 3e-28 seq3441 125 2e-23 >seq1995 Length=54681 Score = 358 bits (396), Expect = 2e-93 Identities = 697/1016 (69%), Gaps = 34/1016 (3%) Strand=Plus/Plus Query 188611 CCAAATGAAATTGTTGAATTATTAGATAATCATATTATTGGACAAGAAAAAGCAAAACGT 188670 ||||| ||||| | | || ||| |||| || | ||||||||||||||||||||||| Sbjct 631 CCAAAAGAAATAAATAATTTTTTAAATAAATATGTAATTGGACAAGAAAAAGCAAAACGA 690 Query 188671 CAATTAGCTGTATCAGTTTATAATCATTATAAGCGCATT-AATGCTCTT-AATGaaaaat 188728 ||| |||| | || |||||||||||||| || ||| ||| | || || |||||| Sbjct 691 GTTTTATCTGTGGCCGTATATAATCATTATAAACGTATTCAATATTTTTTAAATAAAAAT 750 Query 188729 caaaaaatgatgatggagtaaagatcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTG 188788 | ||| ||||||| | || ||| |||| | ||| | | | |||| |||||| Sbjct 751 AATAAA--GATGATGTTG-AATTATCTAAAAGT--AATATATTAATGATTGGTTCTACTG 805 Query 188789 GTTCAGGTAAAACATTATTTGCTCAAACATTGGCTGATATGTTACATGTACCTCTAGCTA 188848 | || |||||||| ||||| || |||||||||||| |||| || |||| || | | || Sbjct 806 GATCTGGTAAAACTTTATTAGCGCAAACATTGGCTCGTATGCTAAATGTTCCATTTGTTA 865 Query 188849 TCTCTGATGCAACTTCTTTAACAGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTAT 188908 | | ||||| || | |||||||||||||||||||| ||||||||||| || || | Sbjct 866 TTGCAGATGCTACAACATTAACAGAAGCTGGTTATGTTGGTGAAGATGTAGAGAATATTA 925 Query 188909 TGCTTCGTTTAATCCAAGCAGCTG--ATTACGATATCGAATTAGCGGAACGTGGAATTGT 188966 | | ||| | ||| || || |||| | | ||| ||| || |||||| | Sbjct 926 TACAAAAATTATTACAA--AGTTGTAATTATAACGTTGAAAAAGCACAAAAAGGAATTAT 983 Query 188967 ATATATCGATGAAGTAGATAAAATTGCTAGAAAATCAGAAAGCACATCCATTACCCGAGA 189026 |||||| |||||| | ||||||||| || | |||||||||| |||| ||||| ||||| Sbjct 984 ATATATTGATGAAATTGATAAAATTTCTCGTAAATCAGAAAATCCATCTATTACACGAGA 1043 Query 189027 TGTATCTGGCGAAGGAGTACAGCAAGCTTTATTAAAAATCATTGAAGGTACAGTTGCGAA 189086 ||| ||||| ||||||||||||||||| ||||||||| | ||||| || ||| | || Sbjct 1044 TGTTTCTGGAGAAGGAGTACAGCAAGCATTATTAAAATTAATTGAGGGGACAATAGCATC 1103 Query 189087 AGTTCCTCCTCAAGGTGGTCGTAAACACCCTCACCAAGAAATGCTTGAAATAGATACAAC 189146 || ||||| || ||||| ||||| || | ||||| | | || | |||||||| Sbjct 1104 TGTACCTCCCGCGGGAGGTCGCAAACATCCAGATCAAGATTTTATACAAGTTGATACAAC 1163 Query 189147 TAATATCTTGTTTATTCTTGGTGGAGCGTTTGATGGTCTTGAAAACATTA-TCAAGAGAC 189205 |||||| |||||||| ||| ||||||||| |||| | || | |||| | ||| || Sbjct 1164 TAATATTATGTTTATTTGTGGAGGAGCGTTTAATGGGTTAGATCAAATTATTTTAGA-AC 1222 Query 189206 GCGCTACAAAATCAACTTTAGGTTTTGATGATAGTGTAGATAAAGTACAAGAAGAAATCA 189265 | || |||| | | | | || ||| | | | | |||| || | | ||| Sbjct 1223 GTTCTCAAAAAACGAGTATTGGATTTTCT----GCGGAAATAA--TAGACG-----ATC- 1270 Query 189266 AGGATGACAATAAAGTATTCCAACATCTTCAACCGCAAGATATTGTTAAGTATGGTTTAA 189325 |||| || ||| |||| | ||| ||||| ||||| | |||| | |||| | | Sbjct 1271 ---ATGATAAAAAAATATT---AAATCCAGAACCGGAAGATCTCATTAAATTTGGTCTTA 1324 Query 189326 TTCCAGAATTTATTGGGCGTGTACCAGTAATCGCAACTCTTAACAAACTTGATCGAGATG 189385 | || ||||| |||||||| | ||| || | ||| | | |||||||| | | Sbjct 1325 TCCCGGAATTAATTGGGCGATTGCCAATAGTTATTACTTTACATGAACTTGATGAATCAG 1384 Query 189386 CATTGATTAACATTTTAACTGAGCCGCAAAACGCTATCATTAAACAATATCAGAAATTGT 189445 || | || |||||| || || |||| || | |||||||||||| ||||| | Sbjct 1385 TTTTAAAAAAGATTTTATTAGAACCTAAAAATGCGTTAATTAAACAATATTCAAAATTAT 1444 Query 189446 TAGATATGGATGGCGTGGAATTAGAATTCCAAAAAGAAGCATTAGAATCAATTGCAGATG 189505 |||| ||||| || |||||||| | | | |||| ||| | | |||| | Sbjct 1445 TAGAAATGGAAAATGTAAAATTAGAAATTAAGCCAAAAGCTTTAAATTTTATTGTTAAAA 1504 Query 189506 AAGCGATTGAACGTAATACTGGTGCTCGCGGATTACAATCCATTATTGAAAATATTATGT 189565 |||| || | ||| || ||||| || |||| ||| || | || | ||| || Sbjct 1505 AAGCTTTTACGAGAAATTTAGGGGCTCGTGGTTTACGATCAATATTAGAGGAAATTTTGC 1564 Query 189566 TAGATGTAATGTATGAAGTTCCAGCTCGAAAAGATGAGATTGAAAAAATCATCATT 189621 | |||||||||||||| | ||| | |||| ||| || ||||||| || ||| Sbjct 1565 TTAATGTAATGTATGAACTACCAAATAAAAAAAATG---TTAAAAAAATAATTATT 1617 >seq1728 Length=64960 Score = 141 bits (156), Expect = 3e-28 Identities = 300/443 (68%), Gaps = 15/443 (3%) Strand=Plus/Plus Query 182365 ATGGGTAATTTCCATCCACATGGTGAT------ACTTATGGTGTAATGGTAAATATGACA 182418 ||||| || | |||||| ||||||||| | ||||| || | |||| ||| || Sbjct 26210 ATGGGAAAATACCATCCTCATGGTGATGTATCAATTTATGATGCTTTAGTAAGAATGGCA 26269 Query 182419 AATGAATTAAGTATTCGATATCCAGTAGTTGATGGTCAGGGTAACTTTGGTAACCCATTA 182478 | ||| | | || | || |||| ||||| || ||||| |||||| | || Sbjct 26270 CAATCATTTTCTTTACGTTGCACATTAGTAGATGGACAAGGTAATTTTGGTT---CTATA 26326 Query 182479 GATGGTGATGGTGCAGCAGCGATGCGTTATACTGAAGCACGTTTAGAT-AATCTTGGAAT 182537 ||||| ||| |||| || || ||||||||||||||| |||||| || || || ||| Sbjct 26327 GATGGGGATAGTGCTGCGGCAATGCGTTATACTGAATGTCGTTTAAATAAAATTTCTAAT 26386 Query 182538 GTTAATGCTACAAGATGTTGACAAAAAAGTTGTTGACTTCCAACCTAACTATTCTGAAGA 182597 | | | || ||| | || ||| || | |||| || | || ||| || | | Sbjct 26387 G-AATTACTTATTGATTTAGATAAAGAAACTATTGATTTTATTTCAAATTATGATGGAAA 26445 Query 182598 AACAGAAGAACCAGTGATTTTACCAGCAGGGATTCCATACTTACTTATAAATGGAGCAAC 182657 | | |||||||| | |||||| || | |||||| | ||||| |||||||| | | Sbjct 26446 AGAAAAAGAACCATCTGTATTACCAACACGTATTCCAAATTTACTAATAAATGGTTCTTC 26505 Query 182658 TGGTATTGCAACTGGTTATACTACTGACATACCTTCCCATAATTTAAGCGAAGTAATTGA 182717 ||||||||| |||| | ||| |||||||| | |||||||||| ||||| ||||| Sbjct 26506 TGGTATTGCTGTTGGTATGGCGACTAACATACCTCCTCATAATTTAACAGAAGTTATTGA 26565 Query 182718 TGGTATCTTAAATTTAATTCAAAATCCTGAAATTGAT--ATTCATGGGTTAATGAAACAC 182775 |||| | ||| || | | || ||||| ||| || | ||| ||| ||||| || Sbjct 26566 TGGTGTATTATATGTTTTACATAATCCAGAA--TGCTCAATTAATGATTTAATCAAGATA 26623 Query 182776 ATTAAAGGTCCTGATTTACCTAC 182798 ||| || ||||||||| || || Sbjct 26624 ATTCCAGCTCCTGATTTTCCAAC 26646 >seq3441 Length=19901 Score = 125 bits (138), Expect = 2e-23 Identities = 297/445 (67%), Gaps = 18/445 (4%) Strand=Plus/Plus Query 188631 ATTAGATAATCATATTATTGGACAAGAAAAAGCAAAACGTCAATTAGCTGTATCAGTTTA 188690 |||||||| ||||| ||||||||| | || ||||| | || ||||| |||||| Sbjct 19232 ATTAGATAGACATATAATTGGACAACATGAAACAAAAAAAATAGTATCTGTAGGAGTTTA 19291 Query 188691 TAATCATTATAAGCGCATTAATGCTCTTAATGaaaaatcaaaaaatgatgatggagtaaa 188750 |||||||||||| | |||| | || || ||| ||||||||| | || || Sbjct 19292 TAATCATTATAAAAG-ATTA----TTTTTAT-TAAAGTCAAAAAATATTTATTTAG---- 19341 Query 188751 gatcaaaaaaTCTAATGTTCTTTTAGTTGGCCCTACTGGTTCAGGTAAAACATTATTTGC 188810 |||||| | ||| | | |||| || |||||||| | || ||||| ||| | | Sbjct 19342 ----AAAAAAGC-AATATATTGCTAGTAGGTCCTACTGGATGTGGAAAAACTTTAATGGT 19396 Query 188811 TCAAACATTGGCTGATATGTTACATGTACCTCTAGCTATCTCTGATGCAACTTCTTTAAC 188870 ||||| | || | || || |||| ||| | | | |||||| || ||||| || Sbjct 19397 AAAAACACTTGCAAAAATAATAAATGTTCCTATTATTGTTGTTGATGCTACATCTTTTAC 19456 Query 188871 AGAAGCTGGTTATGTAGGTGAAGATGTGGAAAACGTATTGCTTCGTTTAATCCAAGCAGC 188930 ||| || || || ||||| || ||||| ||| | | | || | || | | Sbjct 19457 AGAGGCAGGATACGTAGGAGATGATGTAGAATCTATCATACAAAAATTGTTGCATGAATG 19516 Query 188931 TGATTACGATATCGAATTAGCGGAACGTGGAATTGTATATATCGATGAAGTAGATAAAAT 188990 |||||||||| | |||||||| |||| | ||| |||| || |||||| | |||||||| Sbjct 19517 TGATTACGATGTAGAATTAGCTGAACAAAGTATTATATACATAGATGAAATTGATAAAAT 19576 Query 188991 TGCTAGAAAATCAGAAAGCACATCCATTACCCGAGATGTATCTGGCGAAGGAGTACAGCA 189050 | | | |||| | || || | ||||||||| || ||||| || || || Sbjct 19577 TTCAAAAAAAACTGATGTTGTGTC---TGGAAAAGATGTATCAGGAGAAGGTGTTCAACA 19633 Query 189051 AGCTTTATTAAAAATCATTGAAGGT 189075 | | ||||||||| | || |||||| Sbjct 19634 ATCATTATTAAAATTAATAGAAGGT 19658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588606435732224