Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_025447.1 Length=348532 Score E Sequences producing significant alignments: (Bits) Value seq1728 120 7e-22 seq1337 120 7e-22 seq25611 98.7 2e-15 seq1112 98.7 2e-15 >seq1728 Length=64960 Score = 120 bits (132), Expect = 7e-22 Identities = 237/346 (68%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075 ||||| | | |||| || | | | ||| ||| ||||| || || |||||||| |||||| Sbjct 3880 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 3822 Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132 ||||| ||| | | || | |||||||| || || || | || ||| ||| || Sbjct 3821 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 3762 Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191 || || |||||| | |||| |||| |||| | ||| ||||| | || ||||| || Sbjct 3761 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 3706 Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251 | |||||||| || |||| | | || ||||| || ||| | ||||| || || Sbjct 3705 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 3646 Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311 ||| | ||||||||||| || |||| || |||||| ||||| || |||||| Sbjct 3645 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 3586 Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357 |||||| |||| ||||| || || |||||| | ||||| Sbjct 3585 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 3540 Score = 120 bits (132), Expect = 7e-22 Identities = 237/346 (68%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075 ||||| | | |||| || | | | ||| ||| ||||| || || |||||||| |||||| Sbjct 10587 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 10529 Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132 ||||| ||| | | || | |||||||| || || || | || ||| ||| || Sbjct 10528 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 10469 Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191 || || |||||| | |||| |||| |||| | ||| ||||| | || ||||| || Sbjct 10468 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 10413 Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251 | |||||||| || |||| | | || ||||| || ||| | ||||| || || Sbjct 10412 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 10353 Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311 ||| | ||||||||||| || |||| || |||||| ||||| || |||||| Sbjct 10352 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 10293 Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357 |||||| |||| ||||| || || |||||| | ||||| Sbjct 10292 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 10247 >seq1337 Length=71271 Score = 120 bits (132), Expect = 7e-22 Identities = 237/346 (68%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075 ||||| | | |||| || | | | ||| ||| ||||| || || |||||||| |||||| Sbjct 69994 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 69936 Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132 ||||| ||| | | || | |||||||| || || || | || ||| ||| || Sbjct 69935 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 69876 Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191 || || |||||| | |||| |||| |||| | ||| ||||| | || ||||| || Sbjct 69875 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 69820 Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251 | |||||||| || |||| | | || ||||| || ||| | ||||| || || Sbjct 69819 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 69760 Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311 ||| | ||||||||||| || |||| || |||||| ||||| || |||||| Sbjct 69759 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 69700 Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357 |||||| |||| ||||| || || |||||| | ||||| Sbjct 69699 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 69654 >seq25611 Length=761 Score = 98.7 bits (108), Expect = 2e-15 Identities = 168/239 (70%), Gaps = 10/239 (4%) Strand=Plus/Plus Query 279290 GCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAA 279349 || ||||| ||| || || || | |||| ||||| |||||||||| || | ||| Sbjct 381 GCCTGGAATGTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAA 440 Query 279350 TTTTGTGTAGTGCAAGGAA--AACTAAGCTGT--ATTCTGCATCAACGCTCCGCTGATCT 279405 |||| |||| ||| || || || ||| ||| | ||||||| || ||| | Sbjct 441 TTTTACGTAG--CAAATAATAAATTATCTTGTCAATTAT--ATCAACGTAGTGCGGATAT 496 Query 279406 ATTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACA 279465 ||||||||| | ||||||||||| | || || || ||| |||||| || ||||| Sbjct 497 TTTTTTAGGATTACCATTTAATATTGCTTCATATTCGTTATTAATTCATATAATAGCACA 556 Query 279466 AATTACTGGTTTAGATGTTGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATA 279524 || || ||| | |||||||| ||||| |||| ||| ||||||||| |||||||| Sbjct 557 CGAAACAGGATTAAAGGTTGGTGATTTTATATGGACTGGAGGTGATTGT--CATTTATA 613 >seq1112 Length=102550 Score = 98.7 bits (108), Expect = 2e-15 Identities = 168/239 (70%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 279290 GCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAA 279349 || ||||| ||| || || || | |||| ||||| |||||||||| || | ||| Sbjct 24737 GCCTGGAATGTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAA 24678 Query 279350 TTTTGTGTAGTGCAAGGAA--AACTAAGCTGT--ATTCTGCATCAACGCTCCGCTGATCT 279405 |||| |||| ||| || || || ||| ||| | ||||||| || ||| | Sbjct 24677 TTTTACGTAG--CAAATAATAAATTATCTTGTCAATTAT--ATCAACGTAGTGCGGATAT 24622 Query 279406 ATTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACA 279465 ||||||||| | ||||||||||| | || || || ||| |||||| || ||||| Sbjct 24621 TTTTTTAGGATTACCATTTAATATTGCTTCATATTCGTTATTAATTCATATAATAGCACA 24562 Query 279466 AATTACTGGTTTAGATGTTGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATA 279524 || || ||| | |||||||| ||||| |||| ||| ||||||||| |||||||| Sbjct 24561 CGAAACAGGATTAAAGGTTGGTGATTTTATATGGACTGGAGGTGATTGT--CATTTATA 24505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1112856694235572