Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22]
161,988 sequences; 485,705,082 total letters
Query= NC_025447.1
Length=348532
Score E
Sequences producing significant alignments: (Bits) Value
seq1728 120 7e-22
seq1337 120 7e-22
seq25611 98.7 2e-15
seq1112 98.7 2e-15
>seq1728
Length=64960
Score = 120 bits (132), Expect = 7e-22
Identities = 237/346 (68%), Gaps = 10/346 (3%)
Strand=Plus/Minus
Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075
||||| | | |||| || | | | ||| ||| ||||| || || |||||||| ||||||
Sbjct 3880 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 3822
Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132
||||| ||| | | || | |||||||| || || || | || ||| ||| ||
Sbjct 3821 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 3762
Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191
|| || |||||| | |||| |||| |||| | ||| ||||| | || ||||| ||
Sbjct 3761 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 3706
Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251
| |||||||| || |||| | | || ||||| || ||| | ||||| || ||
Sbjct 3705 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 3646
Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311
||| | ||||||||||| || |||| || |||||| ||||| || ||||||
Sbjct 3645 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 3586
Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357
|||||| |||| ||||| || || |||||| | |||||
Sbjct 3585 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 3540
Score = 120 bits (132), Expect = 7e-22
Identities = 237/346 (68%), Gaps = 10/346 (3%)
Strand=Plus/Minus
Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075
||||| | | |||| || | | | ||| ||| ||||| || || |||||||| ||||||
Sbjct 10587 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 10529
Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132
||||| ||| | | || | |||||||| || || || | || ||| ||| ||
Sbjct 10528 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 10469
Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191
|| || |||||| | |||| |||| |||| | ||| ||||| | || ||||| ||
Sbjct 10468 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 10413
Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251
| |||||||| || |||| | | || ||||| || ||| | ||||| || ||
Sbjct 10412 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 10353
Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311
||| | ||||||||||| || |||| || |||||| ||||| || ||||||
Sbjct 10352 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 10293
Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357
|||||| |||| ||||| || || |||||| | |||||
Sbjct 10292 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 10247
>seq1337
Length=71271
Score = 120 bits (132), Expect = 7e-22
Identities = 237/346 (68%), Gaps = 10/346 (3%)
Strand=Plus/Minus
Query 299017 AAATTCTTTCACTAAATGTTGGTGCATTGACT-GCTGGTACTAAGTATCGTGGTGAATTT 299075
||||| | | |||| || | | | ||| ||| ||||| || || |||||||| ||||||
Sbjct 69994 AAATTTTATTACTAGATATAGCTTTATT-ACTAGCTGGAACAAAATATCGTGGAGAATTT 69936
Query 299076 GAAGAACGCATCGACAATTTGCTAAAAGAACTA---AAGAAACGTGAAAATACTATTGTT 299132
||||| ||| | | || | |||||||| || || || | || ||| ||| ||
Sbjct 69935 GAAGATCGCTTAAAAAAAATATTAAAAGAAATATCTAATAATCAAAAAGATATTATAATT 69876
Query 299133 TTCATTGATGAAATTCATATTATGGTTGGGGCTGGTTCCGCAAGTA-ATGGTTCTATGGA 299191
|| || |||||| | |||| |||| |||| | ||| ||||| | || ||||| ||
Sbjct 69875 TTTATAGATGAATTACATACTATGATTGGAACAGGTA----AAGTAGAGGGCTCTATAGA 69820
Query 299192 CATGAGCAATATGCTTAAGCCAGCACTTTCACGTGGTGAGATTCGTGTAATTGGTGCAAC 299251
| |||||||| || |||| | | || ||||| || ||| | ||||| || ||
Sbjct 69819 TGCTGGTAATATGCTGAAACCAGAATTATCTCGTGGAGAACTTCATTGTATTGGGGCCAC 69760
Query 299252 AACATATGATGAATATCGTAAAAATATCGAGAAAGATAGTGCATTAACTCGTCGTTTTAT 299311
||| | ||||||||||| || |||| || |||||| ||||| || ||||||
Sbjct 69759 CACACTTAATGAATATCGTCAATATATAGAAAAAGATGCAGCATTTGAGCGCCGTTTTCA 69700
Query 299312 GAAAATTGACGTAGTTGAGCCGACAATTGATGAAACTCGTGCAATT 299357
|||||| |||| ||||| || || |||||| | |||||
Sbjct 69699 AAAAATTTTAGTAGAAGAGCCTGATATCGAGGAAACTATTTCAATT 69654
>seq25611
Length=761
Score = 98.7 bits (108), Expect = 2e-15
Identities = 168/239 (70%), Gaps = 10/239 (4%)
Strand=Plus/Plus
Query 279290 GCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAA 279349
|| ||||| ||| || || || | |||| ||||| |||||||||| || | |||
Sbjct 381 GCCTGGAATGTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAA 440
Query 279350 TTTTGTGTAGTGCAAGGAA--AACTAAGCTGT--ATTCTGCATCAACGCTCCGCTGATCT 279405
|||| |||| ||| || || || ||| ||| | ||||||| || ||| |
Sbjct 441 TTTTACGTAG--CAAATAATAAATTATCTTGTCAATTAT--ATCAACGTAGTGCGGATAT 496
Query 279406 ATTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACA 279465
||||||||| | ||||||||||| | || || || ||| |||||| || |||||
Sbjct 497 TTTTTTAGGATTACCATTTAATATTGCTTCATATTCGTTATTAATTCATATAATAGCACA 556
Query 279466 AATTACTGGTTTAGATGTTGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATA 279524
|| || ||| | |||||||| ||||| |||| ||| ||||||||| ||||||||
Sbjct 557 CGAAACAGGATTAAAGGTTGGTGATTTTATATGGACTGGAGGTGATTGT--CATTTATA 613
>seq1112
Length=102550
Score = 98.7 bits (108), Expect = 2e-15
Identities = 168/239 (70%), Gaps = 10/239 (4%)
Strand=Plus/Minus
Query 279290 GCATGGAACGTTGGTGAGCTTGATGATATGACGTTACCACCTTGTCATAGCTTTGTGCAA 279349
|| ||||| ||| || || || | |||| ||||| |||||||||| || | |||
Sbjct 24737 GCCTGGAATGTTTCCGATATTCATAAAATGAAATTACCTCCTTGTCATATATTATTTCAA 24678
Query 279350 TTTTGTGTAGTGCAAGGAA--AACTAAGCTGT--ATTCTGCATCAACGCTCCGCTGATCT 279405
|||| |||| ||| || || || ||| ||| | ||||||| || ||| |
Sbjct 24677 TTTTACGTAG--CAAATAATAAATTATCTTGTCAATTAT--ATCAACGTAGTGCGGATAT 24622
Query 279406 ATTTTTAGGAGTTCCATTTAATATCAGTAGTTACTCACTACTAACTCATATGATTGCACA 279465
||||||||| | ||||||||||| | || || || ||| |||||| || |||||
Sbjct 24621 TTTTTTAGGATTACCATTTAATATTGCTTCATATTCGTTATTAATTCATATAATAGCACA 24562
Query 279466 AATTACTGGTTTAGATGTTGGTGAATTTATTTGGAATGGTGGTGATTGTCACATTTATA 279524
|| || ||| | |||||||| ||||| |||| ||| ||||||||| ||||||||
Sbjct 24561 CGAAACAGGATTAAAGGTTGGTGATTTTATATGGACTGGAGGTGATTGT--CATTTATA 24505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1112856694235572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |