Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1195 109 5e-19 seq288 105 6e-18 seq612 82.4 7e-11 >seq1195 Length=97530 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||||||||| | | | ||||| || || ||||||||||| | ||| | |||||| Sbjct 71902 AACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTC 71961 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || |||||||| | | |||| |||||||||||||| ||||| || || || || || Sbjct 71962 CAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGGATTCCCTCCTTGTCTTG 72021 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||| || || | | ||| | || || | |||||||| || | || | || || Sbjct 72022 AATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGTCTT 72081 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| |||||| | |||||||||||| Sbjct 72082 TCCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 71671 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 71730 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||| | | |||| |||||||||||||| ||||| ||||| || || || Sbjct 71731 TTCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTC 71790 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | || | || || | |||||||| || | || | || Sbjct 71791 TTGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71850 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || || | |||||||||||| Sbjct 71851 CTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| ||||| || | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 71443 CAATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 71502 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 || | ||||||||||| | |||| |||||||||||||| || || || || || || || Sbjct 71503 CTCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTTGTC 71562 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || || | |||||||| || | || | || Sbjct 71563 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71622 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || || | |||||||||||| Sbjct 71623 CTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 72127 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 72186 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||| | |||| ||||| |||||||| ||||| ||||| || || || Sbjct 72187 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTC 72246 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || || | |||||||| || | || | || Sbjct 72247 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 72306 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||| || || | |||||| ||||| Sbjct 72307 CTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || ||||||||||| | ||| | |||||| Sbjct 68619 ACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCC 68678 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || |||||||| | |||| ||||| |||||||| ||||| || || || || || | Sbjct 68679 AGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCTTGA 68738 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | || || | |||||||| || | || | || || Sbjct 68739 ATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTT 68798 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| || || | |||||||||||| Sbjct 68799 CCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 >seq288 Length=257319 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 247363 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATC 247304 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||| | |||| ||||| |||||||| ||||| || || || || || Sbjct 247303 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247244 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || |||| |||||||| || | || | || Sbjct 247243 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGATGGT 247184 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||||| |||||| | |||||||||||| Sbjct 247183 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 247591 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247532 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||| | |||| ||||| |||||||| ||||| || || || || || Sbjct 247531 TTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTC 247472 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || || | |||||||| || | || | || Sbjct 247471 TTGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGT 247412 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||||| |||||| | |||||||||||| Sbjct 247411 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 247135 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 247076 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| || |||||||| | | |||| ||||| |||||||| ||||| || || || || || Sbjct 247075 TTCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTTGTC 247016 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 ||| || || | | ||| | || || | |||||||| || | || | || Sbjct 247015 TTGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 246956 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || ||||||| |||||| | || |||||||| Sbjct 246955 CTTGCCAGTCAAAGTTTTGACAAAGATCTGCAT 246923 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 || || || ||||||||||| | ||| | |||||| || |||||||| | | || Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 || |||||||||||||| ||||| || || || || || ||| || || | | | Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCTTGAATCTTAGCCTTGACGTTT 257200 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | || || | |||||||| || | || | || || ||||||| |||||| | | Sbjct 257199 TCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGACG 257140 Query 132113 AAAATCTGCAT 132123 ||||||||||| Sbjct 257139 AAAATCTGCAT 257129 >seq612 Length=165075 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||| | | | ||||| || || ||||||||||| | ||| | ||| Sbjct 62093 CAAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATC 62034 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | ||||||||| | | |||| ||||| |||||||| ||||| ||||| || || || Sbjct 62033 TTCCAACTGTTTACCAGCAAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTC 61974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475646133811680