Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq3053 89.7 4e-13 >seq3053 Length=52643 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| || ||||| ||| | ||| |||||| | Sbjct 11463 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 11522 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | |||||| || || ||||| ||||| | || ||| || Sbjct 11523 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 11582 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| || || || ||||| |||||| || || ||||||||| Sbjct 11583 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 11642 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||| || || || || || Sbjct 11643 ATCCAGAAAGAATCTACCCTTCACTTGGTCTT 11674 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||| || ||||| ||| | ||| |||||| | Sbjct 35123 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 35182 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | |||||| || || ||||| ||||| | || ||| || Sbjct 35183 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 35242 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| || || || ||||| |||||| || || ||||||||| Sbjct 35243 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 35302 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATT 106471 || || ||||||||||| || || || || || Sbjct 35303 ATCCAGAAAGAATCTACCCTTCACTTGGTCTT 35334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 ||||||||| ||||| || || ||||| || || ||||| ||| | ||| |||||| | Sbjct 46985 AATGCAAATCTTTGTGAAGACTTTGACCGGTAAAACCATCACCCTAGAAGTTGAACCCAG 47044 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 ||| || ||| | ||||| || || ||||| ||||| | || ||| || Sbjct 47045 TGATACTATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 47104 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 ||| | || |||| ||| || || || || ||||| || || |||||||| Sbjct 47105 GCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAAGACGGACGTACCCTGTCTGATTACAA 47164 Query 106439 CATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||| || ||||||||||| || || || || || | | |||||||| Sbjct 47165 CATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGAGAGGAGGA 47213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401535309336704