Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5034 158 2e-32 seq2842 158 2e-32 seq2703 158 2e-32 seq2134 158 2e-32 >seq5034 Length=9121 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 5869 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 5816 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 5815 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 5756 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 5755 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 5696 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 5695 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 5644 >seq2842 Length=26966 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 3514 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 3567 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 3568 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 3627 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 3628 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 3687 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 3688 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3739 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 21696 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 21749 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 21750 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 21809 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 21810 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 21869 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 21870 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 21921 >seq2703 Length=47987 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 507 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 560 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 561 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 620 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 621 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 680 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 681 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 732 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 47945 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 47892 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 47891 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 47832 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 47831 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 47772 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 47771 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 47720 Score = 134 bits (148), Expect = 2e-25 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| ||||||||| || ||||||||||| |||| ||||||| | |||| Sbjct 38075 CAAGGCCATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGA 38016 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 | || || ||||| | || ||||||||| ||||||| | || || |||||||| Sbjct 38015 GTCCTCCCGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGAC 37956 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||| || | | | ||| |||||||||| ||||||||| ||||||||||||| Sbjct 37955 TGCCGTGCGTCTCCTGCTCCCCGGTGAACTGGCCAAGCACGCCGTGTCCGAGGGCACCA 37897 Score = 105 bits (116), Expect = 1e-16 Identities = 128/173 (74%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| || |||||||| | || Sbjct 9777 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCGGTGTC---TCCTCCAA---GGCC 9830 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | |||| || Sbjct 9831 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAGCGCATCGCCGCCGAATCCTCC 9890 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 || ||||| | || ||||||||| ||||||| | || || |||||||| Sbjct 9891 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGAC 9943 >seq2134 Length=48125 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 35076 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 35129 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 35130 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 35189 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 35190 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 35249 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 35250 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 35301 Score = 158 bits (174), Expect = 2e-32 Identities = 176/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||||||||||||||||||||||||||| |||| | | | ||||| || | || Sbjct 41126 ATCTACAAGGTGCTCAAGCAGGTGCACCCGGACACCG--GAGTC-TCCTCGAA---GGCC 41179 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||| || Sbjct 41180 ATGAGCATCATGAACAGTTTCGTCAACGACATTTTCGAACGCATCGCCGCCGAGTCCTCC 41239 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||||| ||||||| | || || |||||||| |||||| Sbjct 41240 CGTCTGGCCCACTACAACAAGCGGTCCACGATCACGAGTCGGGAAATCCAGACTGCCGTG 41299 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | | | ||| || ||||||| ||||||||| ||||||||||||| Sbjct 41300 CGTCTCCTGCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 41351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7162187159666056