Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_027399.1 Length=346602 Score E Sequences producing significant alignments: (Bits) Value seq1728 96.9 8e-15 seq1337 96.9 8e-15 >seq1728 Length=64960 Score = 96.9 bits (106), Expect = 8e-15 Identities = 208/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACG--TATGGAAGGTATTATTAAAGAAC 48531 ||||| |||||||| ||||| ||||| ||||| || || || ||||| |||||| Sbjct 3848 GCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAAATATTA--AAAGAAA 3791 Query 48532 T---TAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTG 48588 | ||| || | | || || | || | || || |||||| |||||| |||||| || Sbjct 3790 TATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACATACTATGATTGGAA 3731 Query 48589 CTGGTG--GTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTC 48646 | ||| |||| || || ||||| ||| | ||||| ||||||| | | | || Sbjct 3730 CAGGTAAAGTAG-AG----GGCTCTATAGATGCTGGTAATATGCTGAAACCAGAATTATC 3676 Query 48647 ACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGA 48706 ||||| || ||| | ||| || || || || | | |||||||| || | || || Sbjct 3675 TCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGTCAATATATAGA 3616 Query 48707 AAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGATGTAGTTGAACCTAGTATTAA 48766 ||||||||| |||||| ||||| || |||||| |||| || ||| ||| | Sbjct 3615 AAAAGATGCAGCATTTGAGCGCCGTTTTCAAAAAATTTTAGTAGAAGAGCCTGATATCGA 3556 Query 48767 CGAAAC 48772 ||||| Sbjct 3555 GGAAAC 3550 Score = 96.9 bits (106), Expect = 8e-15 Identities = 208/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACG--TATGGAAGGTATTATTAAAGAAC 48531 ||||| |||||||| ||||| ||||| ||||| || || || ||||| |||||| Sbjct 10555 GCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAAATATTA--AAAGAAA 10498 Query 48532 T---TAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTG 48588 | ||| || | | || || | || | || || |||||| |||||| |||||| || Sbjct 10497 TATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACATACTATGATTGGAA 10438 Query 48589 CTGGTG--GTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTC 48646 | ||| |||| || || ||||| ||| | ||||| ||||||| | | | || Sbjct 10437 CAGGTAAAGTAG-AG----GGCTCTATAGATGCTGGTAATATGCTGAAACCAGAATTATC 10383 Query 48647 ACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGA 48706 ||||| || ||| | ||| || || || || | | |||||||| || | || || Sbjct 10382 TCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGTCAATATATAGA 10323 Query 48707 AAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGATGTAGTTGAACCTAGTATTAA 48766 ||||||||| |||||| ||||| || |||||| |||| || ||| ||| | Sbjct 10322 AAAAGATGCAGCATTTGAGCGCCGTTTTCAAAAAATTTTAGTAGAAGAGCCTGATATCGA 10263 Query 48767 CGAAAC 48772 ||||| Sbjct 10262 GGAAAC 10257 >seq1337 Length=71271 Score = 96.9 bits (106), Expect = 8e-15 Identities = 208/306 (68%), Gaps = 14/306 (5%) Strand=Plus/Minus Query 48474 GCTGGTACAAAATACCGTGGTGAATTCGAAGAACG--TATGGAAGGTATTATTAAAGAAC 48531 ||||| |||||||| ||||| ||||| ||||| || || || ||||| |||||| Sbjct 69962 GCTGGAACAAAATATCGTGGAGAATTTGAAGATCGCTTAAAAAAAATATTA--AAAGAAA 69905 Query 48532 T---TAAAAAACGAGAAAATGTAATTTTGTTCATTGATGAAGTACATATTATGATGGGTG 48588 | ||| || | | || || | || | || || |||||| |||||| |||||| || Sbjct 69904 TATCTAATAATCAAAAAGATATTATAATTTTTATAGATGAATTACATACTATGATTGGAA 69845 Query 48589 CTGGTG--GTAGCAGCACTGGATCTATGGATATGAGCAATATCATGAAACCTGCACTTTC 48646 | ||| |||| || || ||||| ||| | ||||| ||||||| | | | || Sbjct 69844 CAGGTAAAGTAG-AG----GGCTCTATAGATGCTGGTAATATGCTGAAACCAGAATTATC 69790 Query 48647 ACGTGGTGATATTCGTGTTATCGGTGCAACAACTTATGAGGAATATCGCCAGAACATTGA 48706 ||||| || ||| | ||| || || || || | | |||||||| || | || || Sbjct 69789 TCGTGGAGAACTTCATTGTATTGGGGCCACCACACTTAATGAATATCGTCAATATATAGA 69730 Query 48707 AAAAGATGCTGCATTTTCCCGCCGCTTCACTAAAATTGATGTAGTTGAACCTAGTATTAA 48766 ||||||||| |||||| ||||| || |||||| |||| || ||| ||| | Sbjct 69729 AAAAGATGCAGCATTTGAGCGCCGTTTTCAAAAAATTTTAGTAGAAGAGCCTGATATCGA 69670 Query 48767 CGAAAC 48772 ||||| Sbjct 69669 GGAAAC 69664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106693512346012