Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq205 138 9e-28 seq204 84.2 2e-11 >seq205 Length=278284 Score = 138 bits (152), Expect = 9e-28 Identities = 236/340 (69%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 40865 AGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACAC 40924 ||||||| | ||||| || |||||||| || | ||| || | |||||| |||| | Sbjct 26587 AGGTGATTTAGGTCCAGTGTATGGATTCCAATGGCGTCACTATGGAGCTGAATACAAGGA 26646 Query 40925 TATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAGATACGAT 40984 |||| | || || || || |||| || |||||| | || | |||| | || || Sbjct 26647 CATGTTTACCGACTACACAGATCAAGGGATTGATCAACTTCAAAACATTATTAACACCAT 26706 Query 40985 TAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGACGTACA 41044 |||| | ||||| || || | || || |||| || |||||||| | || | | Sbjct 26707 TAAAACAAATCCCAATGATCGGAGAATCATTATGTGTGCTTGGAACCCCATTGATATGCC 26766 Query 41045 TTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCA-ATGGTGAAC 41103 | ||||| | ||||||||||||| || ||||| || | | ||| ||||| ||| Sbjct 26767 TAAAATGGCCCTACCACCTTGTCATTGCTTGGCACAGTTCTATG-TGGCAGATGGTAAAC 26825 Query 41104 TGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAG 41163 | || |||||| | || || ||||||| || ||||| || || || || || ||||| | Sbjct 26826 TCTCGTGTCAACTATACCAGAGATCAGCCGATATGGGTCTTGGTGTACCATTCAACATTG 26885 Query 41164 CGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 | |||||| | |||| || ||||||||||| || || || Sbjct 26886 CCAGTTATTCATTGCTGACCTATATGATTGCTCATGTCAC 26925 >seq204 Length=278841 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 43684 AGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTA 43743 ||| ||||| | | |||||| | || || ||||||||||| || || ||| | ||||| Sbjct 77749 AGATAATCCACGTCGCTTTGTCATCTTCCCTATTCAATATCAGGATATCTGGAAGATGTA 77808 Query 43744 CAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAA 43794 || |||||| |||| ||||| ||||| ||||| ||||| ||| | |||| Sbjct 77809 TAAGAAAGCAGAGGCATCATTCTGGACTGCAGAGGAAGTAGATCTCTCTAA 77859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396671330937940