Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1995 95.1 2e-14 >seq1995 Length=54681 Score = 95.1 bits (104), Expect = 2e-14 Identities = 223/335 (67%), Gaps = 4/335 (1%) Strand=Plus/Minus Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541 |||||| | ||| | | |||||| || |||||||| | | |||| | | ||||| Sbjct 19714 ATCAAGTACATCTGCTCTATTAGTTGCTGCAATAACTATCACCCCAGAATTAGCTTCAAA 19655 Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601 |||||||| || | | |||||| | ||||||||| | ||||||| |||| || | Sbjct 19654 ACCATCCATTTCAACTAACATTTGATTTAATGTTTGTTCGCGCTCATCACTTGC--GCCT 19597 Query 11602 ACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACAT 11659 ||| ||| | | || ||| ||||||||||| |||||||| || | |||||| Sbjct 19596 CCCATACCAATTCCTCTATGACGGCCTACCGCATCAATTTCATCAATAAAAATAATACAA 19537 Query 11660 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACA 11719 || ||||| || ||| ||| | ||| || || | || || ||||||||| Sbjct 19536 GGCGCATTTTTTTTAGCATTTTTAAACATATCTCGTACACGAGATGCGCCAACACCAACA 19477 Query 11720 AACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCG 11779 ||||| || ||||| | || | || | || || || || | ||||| ||| Sbjct 19476 AACATTTCAACAAAATCTGAACCTGATATAGTAAAAAACGGTACTTTAGCCTCACCAGCG 19417 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || || ||||| | | || || || |||||||| Sbjct 19416 ATTGCACGGGCTAATAAAGTTTTACCAGTACCTGG 19382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626760329404800