Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1649 98.7 1e-15 seq1995 89.7 6e-13 >seq1649 Length=69447 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 ||||||| ||| |||||||| || || | ||| | || || ||| ||||| Sbjct 6543 GACTGGGCAGCCCTCAAGGAGAAGATTGCCAAGCACGGTGTACGCAATTCTCTACTCATC 6602 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 |||||||||||||| |||||||| ||||| ||| ||||||| ||||| | ||| ||||| Sbjct 6603 GCTCCAATGCCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAACCG 6662 Query 105581 TACACGACGAACATCTA 105597 ||||||| || ||||| Sbjct 6663 TACACGAGTAATATCTA 6679 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 105461 GACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATG 105520 ||||||| ||| |||||||| || || | ||| | || || ||| ||||| Sbjct 14839 GACTGGGCAGCCCTCAAGGAGAAGATTGCCAAGCACGGTGTACGCAATTCTCTACTCATC 14898 Query 105521 GCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 105580 |||||||||||||| |||||||| ||||| ||| ||||||| ||||| | ||| ||||| Sbjct 14899 GCTCCAATGCCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAACCG 14958 Query 105581 TACACGACGAACATCTA 105597 ||||||| || ||||| Sbjct 14959 TACACGAGTAATATCTA 14975 >seq1995 Length=54681 Score = 89.7 bits (98), Expect = 6e-13 Identities = 191/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 9611 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9670 |||||||||||||| || || | ||| || | |||||||| || |||||| | || Sbjct 19659 TCAAAACCATCCATTTCAACTAACATTTGATTTAATGTTTGTTCGCGCTCATCACTTGC- 19601 Query 9671 GGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 9728 || | ||| ||| | | || || || |||||||| |||||||| || | | Sbjct 19600 -GCCTCCCATACCAATTCCTCTATGACGGCCTACCGCATCAATTTCATCAATAAAAATAA 19542 Query 9729 TGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACAC 9788 | || || ||||| ||| || ||| | ||| |||||||| ||||| |||| Sbjct 19541 TACAAGGCGCATTTTTTTTAGCATTTTTAAACATATCTCGTACACGAGATGCGCCAACAC 19482 Query 9789 CAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCA 9847 |||||||||| || ||||| | || | || | | | | || || || |||| ||| Sbjct 19481 CAACAAACATTTCAACAAAATCTGAACCTGATATAGT-AAAAAACGGTACTTTAGCCTCA 19423 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 || || || || ||||| | | ||| ||||| |||||||| Sbjct 19422 CCAGCGATTGCACGGGCTAATAAAGTTTTACCAGTACCTGG 19382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582079784369120