Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1649 118 1e-21 seq13586 109 6e-19 >seq1649 Length=69447 Score = 118 bits (130), Expect = 1e-21 Identities = 143/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 20606 ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATC 20665 || |||||||| ||||||||| | |||| ||| || ||||| || || ||||||| | Sbjct 16601 ATTCCCCAGAAGCTCAAGGACCTGTACAAGACGGTGTGGGAGATTCCGCAGAAGACAGTT 16660 Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725 | ||||||||||||||| | || || | ||| |||||||| ||||| ||||| ||| | Sbjct 16661 CTGGACATGGCGGCCGATAGGGGAGCGTTCATAGACCAGTCTCAGTCACTCAACATCTAC 16720 Query 20726 ATGGAG--AATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGG 20783 |||| | |||| | | || || ||||||| |||||| | |||||||| | | Sbjct 16721 ATGGCGGAAATC--AACTATGCCAAAATGAGCTCGATGCATTTCCACGGCTGGAAGCTAG 16778 Query 20784 GGCTCAAGACGGG 20796 | ||||| ||||| Sbjct 16779 GACTCAAAACGGG 16791 Score = 105 bits (116), Expect = 7e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 20606 ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATC 20665 || |||||||| ||||||||| | |||| || || ||||| || || ||||||| | Sbjct 7985 ATTCCCCAGAAGCTCAAGGACCTGTACAAAACGGTGTGGGAGATTCCGCAGAAGACAGTT 8044 Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725 | ||||||||||||||| | || || | ||| |||||||| ||||| ||||| ||| | Sbjct 8045 CTGGACATGGCGGCCGATAGGGGAGCGTTCATAGACCAGTCTCAGTCACTCAACATCTAC 8104 Query 20726 ATGGAGAATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGG 20776 |||| | | | | || || ||||||| |||||| | |||||||| Sbjct 8105 ATGGCGGAAATAAACTACGCCAAAATGAGCTCAATGCATTTCCACGGCTGG 8155 Score = 100 bits (110), Expect = 3e-16 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAAC-CTTCT 79381 |||||| |||| ||| ||||||||||| ||| | | || |||| || | ||| Sbjct 2609 CAGGCCTCGGCAGGCGTTGGGGCACATCAGACTCCACTGAGCATCACTCTCCACGCGTCT 2550 Query 79382 CCATGAAGAGGTCCGGGATCCACAGGGCCGT-GAAGAGGTCGCGGCAACGCATCTCCTCG 79440 | ||||| |||||| ||||||||| |||| ||| ||||| || || | ||| || Sbjct 2549 C-ATGAATTCGTCCGGTATCCACAGG-CCGTAGAACAGGTCCCGCGCGCGGAACTCTTCC 2492 Query 79441 TCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGA 79500 | ||| |||| |||||||| ||||| | |||||| ||||||||||||||||| Sbjct 2491 TTGCCGGTGTTCTTCTTGAGCTCGAGGAAGTCGAAAATGTCGCCGTGCCACGGCTCCAGA 2432 Query 79501 TAGATGGCGAA 79511 ||||||||||| Sbjct 2431 TAGATGGCGAA 2421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 78275 CCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCGCGGTCGGCCGCCATGT 78334 ||||| |||||||||| ||||| |||||||| ||| |||| || | ||||||||||||| Sbjct 16724 CCATGTAGATGTTGAGTGACTGAGACTGGTCTATGAACGCTCCCCTATCGGCCGCCATGT 16665 Query 78335 CGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATGGCCTTCAGCT 78388 | | || | ||| |||||||||||||| | ||| ||| | | |||| |||| Sbjct 16664 CCAGAACTGTCTTCTGCGGAATCTCCCACACCGTCTTGTACAGGTCCTTGAGCT 16611 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAAC-CTTCT 79381 |||||| |||| || ||||||||||| ||| | | || |||| || | ||| Sbjct 3832 CAGGCCTCGGCAGGTGTTGGGGCACATCAGACTCCACTGAGCATCACTCTCCACGCGTCT 3773 Query 79382 CCATGAAGAGGTCCGGGATCCACAGGGCCGT-GAAGAGGTCGCGGCAACGCATCTCCTCG 79440 | ||||| |||||| ||||||||| |||| ||| ||||| || || | ||| || Sbjct 3772 C-ATGAATTCGTCCGGTATCCACAGG-CCGTAGAACAGGTCCCGCGCGCGGAACTCTTCC 3715 Query 79441 TCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGA 79500 | ||| |||| |||||||| ||||| | |||||| ||||||||||||||||| Sbjct 3714 TTGCCGGTGTTCTTCTTGAGCTCGAGGAAGTCGAAAATGTCGCCGTGCCACGGCTCCAGA 3655 Query 79501 TAGATGGCGAA 79511 ||||||||||| Sbjct 3654 TAGATGGCGAA 3644 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/190 (71%), Gaps = 12/190 (6%) Strand=Plus/Plus Query 20291 GGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC------GCC 20344 ||||| || ||| |||||||||||||| || | || ||||| | ||| Sbjct 6495 GGTATTCTTCAGTACGACATGTGGGGCGTGACACCCACAGATCTTTGGGACTGGGCAGCC 6554 Query 20345 CTCAAGGTTGAGAT---CAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401 ||||||| |||| |||| ||||| | ||||| || | ||| |||| || ||| Sbjct 6555 CTCAAGGAGAAGATTGCCAAG---CACGGTGTACGCAATTCTCTACTCATCGCTCCAATG 6611 Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461 || || ||||| || || |||||| |||| ||||| ||| | ||||| |||||||||| Sbjct 6612 CCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAACCGTACACGAGT 6671 Query 20462 AACATCTACT 20471 || ||||||| Sbjct 6672 AATATCTACT 6681 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 |||||| || |||||||||| ||||| | ||| ||||| |||| |||||| || || || Sbjct 6680 GTAGATATTACTCGTGTACGGTTCGAAGGACTCATTGTTACCCAGGATCTGTGCAGTGGA 6621 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| || ||||| || |||| ||||||||||| || | ||| ||| | |||| | Sbjct 6620 GGCCGTTGGCATTGGAGCGATGAGTAGAGAATTGCGTACACCGTGCTTGGCAATCTTCTC 6561 Query 78654 CTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| ||| | |||||||| || | | | | ||||||||||| ||||| Sbjct 6560 CTTGAGGGCTGCCCAGTCCCAAAGATCTGTGGGTGTCACGCCCCACATGTCGTACTGAAG 6501 Query 78708 GATACC 78713 ||||| Sbjct 6500 AATACC 6495 Score = 93.3 bits (102), Expect = 5e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 78275 CCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCGCGGTCGGCCGCCATGT 78334 ||||| |||||||||| ||||| |||||||| ||| |||| || | ||||||||||||| Sbjct 8108 CCATGTAGATGTTGAGTGACTGAGACTGGTCTATGAACGCTCCCCTATCGGCCGCCATGT 8049 Query 78335 CGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATGGCCTTCAGCT 78388 | | || | ||| |||||||||||||| | || ||| | | |||| |||| Sbjct 8048 CCAGAACTGTCTTCTGCGGAATCTCCCACACCGTTTTGTACAGGTCCTTGAGCT 7995 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/190 (71%), Gaps = 12/190 (6%) Strand=Plus/Plus Query 20291 GGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC------GCC 20344 ||||| || ||| |||||||||||||| || | || ||||| | ||| Sbjct 14791 GGTATTCTTCAGTACGACATGTGGGGCGTGACACCCACAGATCTTTGGGACTGGGCAGCC 14850 Query 20345 CTCAAGGTTGAGAT---CAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATG 20401 ||||||| |||| |||| ||||| | ||||| || | ||| |||| || ||| Sbjct 14851 CTCAAGGAGAAGATTGCCAAG---CACGGTGTACGCAATTCTCTACTCATCGCTCCAATG 14907 Query 20402 CCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACC 20461 || || ||||| || || |||||| |||| ||||| ||| | ||||| |||||||||| Sbjct 14908 CCAACGGCCTCCACTGCACAGATCCTGGGTAACAATGAGTCCTTCGAACCGTACACGAGT 14967 Query 20462 AACATCTACT 20471 || ||||||| Sbjct 14968 AATATCTACT 14977 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 78534 GTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGA 78593 |||||| || |||||||||| ||||| | ||| ||||| |||| |||||| || || || Sbjct 14976 GTAGATATTACTCGTGTACGGTTCGAAGGACTCATTGTTACCCAGGATCTGTGCAGTGGA 14917 Query 78594 GGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGAC 78653 ||| || ||||| || |||| ||||||||||| || | ||| ||| | |||| | Sbjct 14916 GGCCGTTGGCATTGGAGCGATGAGTAGAGAATTGCGTACACCGTGCTTGGCAATCTTCTC 14857 Query 78654 CTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAG 78707 ||| ||| | |||||||| || | | | | ||||||||||| ||||| Sbjct 14856 CTTGAGGGCTGCCCAGTCCCAAAGATCTGTGGGTGTCACGCCCCACATGTCGTACTGAAG 14797 Query 78708 GATACC 78713 ||||| Sbjct 14796 AATACC 14791 Score = 82.4 bits (90), Expect = 8e-11 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 19486 GGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACT 19545 |||| | ||||||||||| || ||||| ||||||| ||| | | || |||||||| || Sbjct 2414 GGGCGCTTTCGCCATCTATCTGGAGCCGTGGCACGGCGACATTTTCGACTTCCTCGAGCT 2473 Query 19546 GCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTC-ACGGCCTTGTGGA 19604 |||| || | || ||| | ||| || ||||| ||| |||||| |||||| Sbjct 2474 CAAGAAGAACACCGGCAAGGAAGAGTTCCGCGCGCGGGACCTGTTCTACGGCC-TGTGGA 2532 Query 19605 TTCCGGACCTATTCATGGAGAAG-GTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCG 19663 | |||||| |||||| |||| | || |||| || | | ||| ||||||||||| Sbjct 2533 TACCGGACGAATTCAT-GAGACGCGTGGAGAGTGATGCTCAGTGGAGTCTGATGTGCCCC 2591 Query 19664 CACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTGTA 19716 ||| |||| ||||| | ||| || || ||| ||| |||| |||| Sbjct 2592 AACGCCTGCCGAGGCCTGTCGGACTCCTGGGGAGAGAAGTTTGATGACCTGTA 2644 >seq13586 Length=1320 Score = 109 bits (120), Expect = 6e-19 Identities = 129/173 (75%), Gaps = 4/173 (2%) Strand=Plus/Plus Query 20606 ATCCCCCAGAACCTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATC 20665 || |||||||| ||||||||| | |||| ||| || ||||| || || ||||||| | Sbjct 599 ATTCCCCAGAAGCTCAAGGACCTGTACAAGACGGTGTGGGAGATTCCGCAGAAGACAGTT 658 Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725 | ||||||||||||||| | || || | ||| |||||||| ||||| ||||| ||| | Sbjct 659 CTGGACATGGCGGCCGATAGGGGAGCGTTCATAGACCAGTCTCAGTCACTCAACATCTAC 718 Query 20726 ATGGAG--AATCCGAGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGG 20776 |||| | |||| | | || || ||||||| |||||| | | |||||| Sbjct 719 ATGGCGGAAATC--AACTATGCCAAAATGAGCTCGATGCATTTCCATGGCTGG 769 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 78275 CCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCGCGGTCGGCCGCCATGT 78334 ||||| |||||||||| ||||| |||||||| ||| |||| || | ||||||||||||| Sbjct 722 CCATGTAGATGTTGAGTGACTGAGACTGGTCTATGAACGCTCCCCTATCGGCCGCCATGT 663 Query 78335 CGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATGGCCTTCAGCT 78388 | | || | ||| |||||||||||||| | ||| ||| | | |||| |||| Sbjct 662 CCAGAACTGTCTTCTGCGGAATCTCCCACACCGTCTTGTACAGGTCCTTGAGCT 609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547414119558720