Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq205 113 4e-20 seq2392 82.4 6e-11 >seq205 Length=278284 Score = 113 bits (124), Expect = 4e-20 Identities = 230/336 (68%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004 || ||||| ||||| ||||| || || || | || || ||||| ||||| || ||||| Sbjct 26928 CCAGTGACATGAGCAATCATATAGGTCAGCAATGAATAACTGGCAATGTTGAATGGTACA 26869 Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACG 30064 || || ||||| || | || |||||||| || ||||||||||| | || || ||| Sbjct 26868 CCAAGACCCATATCGGCTGATCTCTGGTATAGTTGACACGAGAGTTTACCATCTGCCACA 26809 Query 30065 TAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCA--TGAGGCCCAAGTCTTTGGGGT 30122 || ||||| || | || || || || || |||| | ||| || || |||||| Sbjct 26808 TAGAACTGTGCCAAGCAATGACAAGGTGGTAGGGCCATTTTAGG--CATATCAATGGGGT 26751 Query 30123 TCCAGGCGCACACGATGATGCGCCTGTCTTCTGGG--TTGTTCCTGATGAGGTCCACGGC 30180 |||| || |||| ||||| | || || | |||| ||||| | ||| || | Sbjct 26750 TCCAAGCACACATAATGATTCTCCGATCAT-TGGGATTTGTT-TTAATGGTGTTAATAAT 26693 Query 30181 GTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGC 30240 |||||| || ||||| | ||| | | |||||| | ||||||| |||| || || Sbjct 26692 GTTTTGAAGTTGATCAATCCCTTGATCTGTGTAGTCGGTAAACATGTCCTTGTATTCAGC 26633 Query 30241 TCCGAAATGCCTCCACTGGAACCCGTACACCGGTCC 30276 ||| | || | ||| ||||| || ||||| || || Sbjct 26632 TCCATAGTGACGCCATTGGAATCCATACACTGGACC 26597 >seq2392 Length=40786 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004 || ||||| ||||| ||||| || || | | || || ||||| ||||| || ||||| Sbjct 30281 CCAGTGACATGAGCAATCATATAGGTCAACAATGAATAACTGGCAATGTTGAATGGTACA 30222 Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACG 30064 || || ||||| || | || |||||||| || ||||||||||| | ||||| ||| Sbjct 30221 CCAAGACCCATATCAGCTGATCTCTGGTATAGTTGACACGAGAGTTTACCGTCTGCCACA 30162 Query 30065 TAAAACTG 30072 || ||||| Sbjct 30161 TAGAACTG 30154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405508250326896