Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_028855.1 Length=44846 Score E Sequences producing significant alignments: (Bits) Value seq1337 102 2e-17 >seq1337 Length=71271 Score = 102 bits (112), Expect = 2e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 30255 ACCATCACGCGCTTTAGCCACAATTATTTCGGCGATACCCTGATCTTTTGAGTTTTTATC 30314 ||||| |||| |||| ||||| |||||||| ||||| | || ||| |||| || Sbjct 54058 ACCATTACGCTGTTTACTAACAATAATTTCGGCAATACCTTTGTCAGCTGAATTTTGATT 54117 Query 30315 ATAATACTCATCACGATATATAAACATGATCACATCTGCGTCCTCTTCAATAGATCCCGA 30374 |||| ||||||||||||||||| | || ||||| || || | |||||| | || || Sbjct 54118 ATAAACTTCATCACGATATATAAATAAAATAACATCAGCATCTTGTTCAATGGCACCAGA 54177 Query 30375 CTCACGAATGTCAGACATTAGAGGTCGTCTATCTTTTCTAGATTCTAAGCTTCGGCTTAA 30434 ||||| | || ||||||| ||| ||| ||| || | ||||| || |||| Sbjct 54178 TTCACGTAAATCTGACATTATAGGACGTTTATTTTGACGTTGCTCTAAAGAACGATTTAA 54237 Query 30435 TTGCGCTAAACAAAAAACAGGACAATCAAATTCTTTTGCTA 30475 ||| | |||| || | || |||| || |||||| |||| Sbjct 54238 TTGTGATAAAGCAAGTATTGGGCAATTAATTTCTTTAGCTA 54278 Score = 102 bits (112), Expect = 2e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 30255 ACCATCACGCGCTTTAGCCACAATTATTTCGGCGATACCCTGATCTTTTGAGTTTTTATC 30314 ||||| |||| |||| ||||| |||||||| ||||| | || ||| |||| || Sbjct 60849 ACCATTACGCTGTTTACTAACAATAATTTCGGCAATACCTTTGTCAGCTGAATTTTGATT 60908 Query 30315 ATAATACTCATCACGATATATAAACATGATCACATCTGCGTCCTCTTCAATAGATCCCGA 30374 |||| ||||||||||||||||| | || ||||| || || | |||||| | || || Sbjct 60909 ATAAACTTCATCACGATATATAAATAAAATAACATCAGCATCTTGTTCAATGGCACCAGA 60968 Query 30375 CTCACGAATGTCAGACATTAGAGGTCGTCTATCTTTTCTAGATTCTAAGCTTCGGCTTAA 30434 ||||| | || ||||||| ||| ||| ||| || | ||||| || |||| Sbjct 60969 TTCACGTAAATCTGACATTATAGGACGTTTATTTTGACGTTGCTCTAAAGAACGATTTAA 61028 Query 30435 TTGCGCTAAACAAAAAACAGGACAATCAAATTCTTTTGCTA 30475 ||| | |||| || | || |||| || |||||| |||| Sbjct 61029 TTGTGATAAAGCAAGTATTGGGCAATTAATTTCTTTAGCTA 61069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143109782384448