Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq25611 163 2e-35 seq1112 163 2e-35 >seq25611 Length=761 Score = 163 bits (180), Expect = 2e-35 Identities = 242/343 (71%), Gaps = 0/343 (0%) Strand=Plus/Minus Query 126117 ATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAA 126176 || || ||||| |||| | ||| ||| | ||| | | ||| | | ||| | ||| Sbjct 586 ATAAAATCACCAACCTTTAATCCTGTTTCGTGTGCTATTATATGAATTAATAACGAATAT 527 Query 126177 CTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAA 126236 |||||||| || || | |||||||| ||||| ||||| | |||||||||||||||| Sbjct 526 GAAGCAATATTAAATGGTAATCCTAAAAAAATATCCGCACTACGTTGATATAATTGACAA 467 Query 126237 TTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATT 126296 ||||||| | | ||||||||||||||| | | | || ||||| |||||| |||| Sbjct 466 GATAATTTATTATTTGCTACGTAAAATTGAAATAATATATGACAAGGAGGTAATTTCATT 407 Query 126297 GAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTT 126356 || || || | | |||||| ||||||||||| | ||||| || |||| ||| Sbjct 406 TTATGAATATCGGAAACATTCCAGGCTGAAACAATAATTCTACGAGAATTAGGATCAGTT 347 Query 126357 TTAATTTGTTGTATAACTGATTTTAATTGATCGTAATGATTTCCATTTTTATCTTCCCAA 126416 |||||||||| |||||| | |||||||| || ||||| | | | | |||| Sbjct 346 TTAATTTGTTTTATAACCCCTGACAATTGATCAATATATTTTCCTTGTAAAGTTGGCCAA 287 Query 126417 TCTCTCCATTGTTTACCATAAACATTCCCTAAGTTGCCATATT 126459 ||||||||| | |||||||| | |||||| | |||| || Sbjct 286 GATCTCCATTGATAACCATAAATAGGCCCTAAATCACCATTTT 244 >seq1112 Length=102550 Score = 163 bits (180), Expect = 2e-35 Identities = 242/343 (71%), Gaps = 0/343 (0%) Strand=Plus/Plus Query 126117 ATGAATTCACCCACCTCAAGTCCACATTCTTTTGCAACAAGATGTGTCAGTAAAGCATAA 126176 || || ||||| |||| | ||| ||| | ||| | | ||| | | ||| | ||| Sbjct 24532 ATAAAATCACCAACCTTTAATCCTGTTTCGTGTGCTATTATATGAATTAATAACGAATAT 24591 Query 126177 CTTGCAATATTGAAAGGAACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAA 126236 |||||||| || || | |||||||| ||||| ||||| | |||||||||||||||| Sbjct 24592 GAAGCAATATTAAATGGTAATCCTAAAAAAATATCCGCACTACGTTGATATAATTGACAA 24651 Query 126237 TTTAATTTACCCTCTTGTACGTAAAATTGAAACATTGTGTGGCAAGGTGGTAATGCCATT 126296 ||||||| | | ||||||||||||||| | | | || ||||| |||||| |||| Sbjct 24652 GATAATTTATTATTTGCTACGTAAAATTGAAATAATATATGACAAGGAGGTAATTTCATT 24711 Query 126297 GAATCGATTTCAGTAGGATTCCATGCTGAAACAATGTGACGTCGAGAGTTTGGATTGGTT 126356 || || || | | |||||| ||||||||||| | ||||| || |||| ||| Sbjct 24712 TTATGAATATCGGAAACATTCCAGGCTGAAACAATAATTCTACGAGAATTAGGATCAGTT 24771 Query 126357 TTAATTTGTTGTATAACTGATTTTAATTGATCGTAATGATTTCCATTTTTATCTTCCCAA 126416 |||||||||| |||||| | |||||||| || ||||| | | | | |||| Sbjct 24772 TTAATTTGTTTTATAACCCCTGACAATTGATCAATATATTTTCCTTGTAAAGTTGGCCAA 24831 Query 126417 TCTCTCCATTGTTTACCATAAACATTCCCTAAGTTGCCATATT 126459 ||||||||| | |||||||| | |||||| | |||| || Sbjct 24832 GATCTCCATTGATAACCATAAATAGGCCCTAAATCACCATTTT 24874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407791733291516