Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3053 107 1e-18 seq619 84.2 2e-11 >seq3053 Length=52643 Score = 107 bits (118), Expect = 1e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || || |||||||| ||||| ||| || || | || || ||| | | Sbjct 11918 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 11977 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || ||| || || ||||| |||||| | || || || Sbjct 11978 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 12037 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| | ||||| || ||||| |||||||| || | ||| | |||||| |||||||| Sbjct 12038 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 12097 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 |||||| ||||| || | || ||||| ||||| ||||||| ||| || Sbjct 12098 CATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGGGGCTAC 12149 Score = 107 bits (118), Expect = 1e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || || |||||||| ||||| ||| || || | || || ||| | | Sbjct 35578 AATGCAAATATTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 35637 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || ||| || || ||||| |||||| | || || || Sbjct 35638 TGACACTATTGAAAACGTGAAAGCTAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 35697 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| | ||||| || ||||| |||||||| || | ||| | |||||| |||||||| Sbjct 35698 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 35757 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 |||||| ||||| || | || ||||| ||||| ||||||| ||| || Sbjct 35758 CATCCAGAAAGAATCTACCCTTCACTTGGTCCTGCGTCTGCGTGGGGGCTAC 35809 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || || |||||||| ||||| ||| || || | || || ||| | | Sbjct 47213 AATGCAAATCTTCGTCAAAACTCTCACTGGAAAAACCATCACCCTAGAAGTTGAACCCTC 47272 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || || || || ||||| |||||| | || || || Sbjct 47273 TGACACTATTGAAAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 47332 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| | ||||| || ||||| |||||||| || | ||| | |||||| |||||||| Sbjct 47333 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAA 47392 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||| ||||| || | || ||||| || ||| | ||||| || Sbjct 47393 CATCCAGAAAGAATCTACCCTTCACTTGGTCTTACGTCTCCGTGGTGG 47440 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| || || |||||||| ||||| ||| ||| || | || || ||| | Sbjct 47669 AATGCAAATCTTCGTCAAAACTCTCACTGGAAAAACTATCACCCTAGAAGTTGAACCATC 47728 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| | | || || ||| || || ||||| |||||| | || || || Sbjct 47729 TGACACTATTGAAAACGTAAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCA 47788 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 |||||| | ||||| || ||||| |||||||| || | ||| | | |||| |||||||| Sbjct 47789 GCAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCCTGTCTGATTACAA 47848 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||| ||||| || | || ||||| || ||| | ||||| || Sbjct 47849 CATCCAGAAAGAATCTACCCTTCACTTGGTCTTACGTCTCCGTGGTGG 47896 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||| ||| | ||||| ||| || || | || |||||| || Sbjct 11463 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 11522 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 || | | || || ||| || || ||||| |||||| | || || ||| Sbjct 11523 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 11582 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | ||||| || ||||| |||||||| || | ||| | |||||| ||||||||| Sbjct 11583 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 11642 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| ||||| || | || ||||| || ||| | ||||| || Sbjct 11643 ATCCAGAAAGAATCTACCCTTCACTTGGTCTTACGTCTCCGTGGTGG 11689 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| || ||||| ||| | ||||| ||| || || | || |||||| || Sbjct 35123 ATGCAAATCTTCGTGAAGACTTTGACTGGAAAAACCATCACCCTAGAAGTCGAACCCAGT 35182 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 || | | || || ||| || || ||||| |||||| | || || ||| Sbjct 35183 GATACTATTGAAAACGTGAAAGCCAAGATCCAAGACAAGGAAGGTATCCCTCCTGACCAG 35242 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 ||||| | ||||| || ||||| |||||||| || | ||| | |||||| ||||||||| Sbjct 35243 CAACGTCTCATTTTCGCTGGAAAGCAATTGGAAGATGGACGTACCTTGTCTGATTACAAC 35302 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| ||||| || | || ||||| || ||| | ||||| || Sbjct 35303 ATCCAGAAAGAATCTACCCTTCACTTGGTCTTACGTCTCCGTGGTGG 35349 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || |||||||| | ||||| || ||||| |||||||| Sbjct 11784 GACAAGGAAGGTATCCCTCCTGACCAGCAACGTCTCATTTTCGCTGGAAAGCAATTGGAA 11843 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | |||||| |||||||||||||| ||||| || | || ||||| || Sbjct 11844 GATGGACGTACCTTGTCTGATTACAACATCCAGAAAGAATCTACCCTTCACTTGGTCTTA 11903 Query 28003 CGTTTGCGTGGCGG 28016 ||| || | || || Sbjct 11904 CGTCTGAGAGGAGG 11917 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || |||||||| | ||||| || ||||| |||||||| Sbjct 35444 GACAAGGAAGGTATCCCTCCTGACCAGCAACGTCTCATTTTCGCTGGAAAGCAATTGGAA 35503 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | |||||| |||||||||||||| ||||| || | || ||||| || Sbjct 35504 GATGGACGTACCTTGTCTGATTACAACATCCAGAAAGAATCTACCCTTCACTTGGTCTTA 35563 Query 28003 CGTTTGCGTGGCGG 28016 ||| || | || || Sbjct 35564 CGTCTGAGAGGAGG 35577 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || |||||||| | |||||||| ||||| || ||||| Sbjct 47079 GACAAGGAAGGTATCCCTCCTGACCAGCAACGTCTCATTTTTGCTGGAAAGCAGTTGGAA 47138 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| ||| | | |||| |||||||||||||| ||||| || | || ||||| || Sbjct 47139 GACGGACGTACCCTGTCTGATTACAACATCCAGAAAGAATCTACCCTTCACTTGGTCCTG 47198 Query 28003 CGTTTGCGTGGCGG 28016 ||| || | || || Sbjct 47199 CGTCTGAGAGGAGG 47212 >seq619 Length=161512 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| |||||| | || || |||||||| | ||||| || ||||| || ||||| Sbjct 111505 GACAAGGAAGGTATCCCTCCTGACCAGCAACGTCTCATTTTCGCTGGAAAGCAGTTGGAA 111564 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| ||| | | |||| |||||||||||||| ||||| || | || ||||| || Sbjct 111565 GACGGACGTACCCTGTCTGATTACAACATCCAGAAAGAATCTACCCTTCACTTGGTCTTA 111624 Query 28003 CGTTTGCGTGGCGG 28016 ||| | ||||| || Sbjct 111625 CGTCTCCGTGGTGG 111638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355159846218876