Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq204 104 3e-17 >seq204 Length=278841 Score = 104 bits (114), Expect = 3e-17 Identities = 100/126 (79%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || || | ||||||||| || || ||||| ||||||||||||||||| |||||||| ||| Sbjct 77859 TTAGAGAGATCTACTTCCTCTGCAGTCCAGAATGATGCCTCTGCTTTCTTATACATCTTC 77800 Query 48687 CATATATCACTG-TATTGGATTGGGAAAATAACAAATCTATTTGGATTTTTTGCAAGGAT 48745 || ||||| ||| ||||| || ||||| || ||||| | | |||||| | | |||| Sbjct 77799 CAGATATC-CTGATATTGAATAGGGAAGATGACAAAGCGACGTGGATTATCTCTCAGGAG 77741 Query 48746 AGGTTC 48751 |||||| Sbjct 77740 AGGTTC 77735 Score = 102 bits (112), Expect = 1e-16 Identities = 153/214 (71%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| || | ||| ||| ||||| || || ||||| || || ||||| || Sbjct 80666 TCATCTCTTGAGATCAGTTCATTACTGAATGTTAGTCCAGGCATGAGGCCGCGTTTCTTA 80607 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAA-AAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| || || | || |||| ||| | | ||||| || || ||||| || ||||| Sbjct 80606 AGCCAGAAGATAGATGC-AAAGCTCCCGGAGAAGAAGATTCCCTCTACACTGGCGAATGC 80548 Query 48284 GGTAAGTCTCTCTCCGTAACTG-----GCTTCGTTGTGTATCCACCGTTGTGCCCAATCA 48338 ||| ||||||||| || || ||||| | ||||| ||| | ||||| || Sbjct 80547 TATAACTCTCTCTCC--AAATGAAGACGCTTCATCTGCAATCCAGCGTAGCGCCCAGTCT 80490 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAG 48372 ||||||||||||||||| |||||||| || |||| Sbjct 80489 GCCTTCTTCTTTACACATGGCATTGTCTCAATAG 80456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693262199880320