Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diaphorina_20citri_20[refseq_20GCF_5F000475195.1_202013-10-22] 161,988 sequences; 485,705,082 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1195 109 5e-19 seq288 102 8e-17 >seq1195 Length=97530 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||||| || || ||| ||||||||| ||||| ||||| || Sbjct 68600 GCCTCCACGAAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 68659 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| | | || || || || || || ||||| ||||| || ||||| || | || Sbjct 68660 GAGGGTTCTACCATCTTCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGG 68719 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCA 41813 | | ||||||||| ||| | || || | || || | |||| | ||||| Sbjct 68720 GATTCCCTCCTTGTCT-TGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCA 68778 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || ||||| ||||| |||||||||||||| Sbjct 68779 CCTCCAAAGTGATGGTCTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 68827 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 71444 AATACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCC 71503 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | ||| || ||||| || ||||| |||||||| || | || | | ||||||||| Sbjct 71504 TCCAACTGTTTACCGGCAAAGATCAGACGCTGTTGATCGGGTGGGATTCCCTCCTTGTCT 71563 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | ||| | | ||||| | ||||||||||| || || || Sbjct 71564 -TGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71622 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| |||||||||||||| Sbjct 71623 CTTGCCAGTCAGGGTCTTGACGAAAATCTGCAT 71655 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 71672 AAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCT 71731 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || || || ||||| |||||||| || | || | || ||||||||| Sbjct 71732 TCCAGGTGTTTACCAGCAAAGATCAGACGCTGTTGATCGGGAGGGATGCCCTCCTTGTCT 71791 Query 41771 ATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | || || | |||| | ||||||||||| || || || Sbjct 71792 -TGAATCTTGGCCTTGACATTCTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 71850 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| |||||||||||||| Sbjct 71851 CTTTCCAGTCAGGGTCTTGACGAAAATCTGCAT 71883 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 72128 AAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCT 72187 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| ||||| || ||||| || | || | || ||||||||| Sbjct 72188 TCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATGCCCTCCTTGTCT 72247 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | ||| | | ||||| | ||||||||||| || || || Sbjct 72248 -TGAATCTTGGCCTTGACGTTTTCGATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 72306 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| ||||| |||||||| ||||| Sbjct 72307 CTTGCCAGTCAGGGTCTTGACGAAAATTTGCAT 72339 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||| || ||| ||||||||| ||||| ||||| ||| Sbjct 71885 CCTCCACGAAGACGGAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 71944 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || || || || || || || ||||| |||||||| || | || Sbjct 71945 AGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAGATCAGACGCTGTTGATCAGGAGGG 72004 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| | || || | ||| | | ||||| | |||||| Sbjct 72005 ATTCCCTCCTTGTCT-TGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCAC 72063 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || || || || |||| || || |||||||||||||| Sbjct 72064 ATCCAAAGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 72111 >seq288 Length=257319 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 247362 AAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCT 247303 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| ||||| || ||||| || | || | | ||||||||| Sbjct 247302 TCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCT 247243 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | ||| | | |||||| | ||||||||||| || || || Sbjct 247242 -TGAATCTTGGCCTTGACGTTTTCGATGGTGTCGGAAGGCTCCACCTCCAAAGTGATGGT 247184 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| || || |||||||||||||| Sbjct 247183 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247151 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 247590 AAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCT 247531 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| ||||| || ||||| || | || | | ||||||||| Sbjct 247530 TCCAGTTGTTTACCAGCGAAGATCAGACGTTGTTGATCAGGAGGGATTCCCTCCTTGTCT 247471 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | ||| | | ||||| | |||||| |||| || || || Sbjct 247470 -TGAATCTTGGCCTTGACGTTTTCGATGGTGTCTGAAGGCTCCACATCCAAAGTGATGGT 247412 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| || || |||||||||||||| Sbjct 247411 CTTTCCAGTCAAAGTTTTGACGAAAATCTGCAT 247379 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||| ||||| ||||| |||||||| | | || || || || || || || || Sbjct 257319 TCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTACCATCTTCCAGTTGTTTACCAGCAAAG 257260 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||||| |||||||| || | || | | ||||||||| ||| | || || | ||| Sbjct 257259 ATCAGACGCTGTTGATCGGGAGGGATTCCCTCCTTGTCT-TGAATCTTAGCCTTGACGTT 257201 Query 41792 GACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||| | ||||||||||| || || || || || |||| || || || Sbjct 257200 TTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGTCTTGCCAGTCAAAGTTTTGAC 257141 Query 41851 GAAAATCTGCAT 41862 |||||||||||| Sbjct 257140 GAAAATCTGCAT 257129 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| ||| || ||| ||||||||| ||||| ||||| |||||||| | | || Sbjct 247134 AAGACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTTCCATCT 247075 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || || || ||||| || ||||| || | || | | ||||||||| Sbjct 247074 TCCAGTTGTTTACCAGCAAAGATCAGACGTTGTTGATCGGGAGGGATTCCCTCCTTGTCT 247015 Query 41771 ATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| | || || | ||| || | |||| | ||||||||||| || || || Sbjct 247014 -TGAATCTTAGCCTTGACGTTTTCAATGGTGTCAGAAGGCTCCACCTCCAAAGTGATGGT 246956 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 || || |||| || || || || |||||||| || Sbjct 246955 CTTGCCAGTCAAAGTTTTGACAAAGATCTGCATCTT 246920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461367903745600