Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq5802 102 8e-17 >seq5802 Length=86632 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 16788 CGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA 16847 ||| |||||||||||| || ||||| || || |||||| | | |||| |||||||||| Sbjct 10121 CGAATAATCTATCCGCGACGAATTCGATGTAGGTGCACATGAGTGCGCAATTCATTCCTA 10180 Query 16848 TAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA 16907 | || ||||||| | || | ||||||||| | || || |||| || ||| | | Sbjct 10181 TCAGCTGTACCGGCAATGCCTGTGTCAAAAATTCCTTTTCAATTTCAACAGCGTCCATGA 10240 Query 16908 TAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967 | ||| | || || || || ||| | ||| | | ||| | ||||||| ||| | Sbjct 10241 TGATAGTTTTGACGCGCTCGAACGAAGGTTTTTGTATGACGTGTCTGAACATCAAACACG 10300 Query 16968 CGAAATCGCAATGTAATCCCT 16988 | ||||||||||| ||||||| Sbjct 10301 CAAAATCGCAATGCAATCCCT 10321 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||| || | | ||||| |||||||| |||||||| || || ||||| Sbjct 11576 ATGTAGGTCTCGATAAGCAAGGAATACATCTCGGAGTGGATGTTCTCTATAGCGATCTGG 11635 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| || || || || |||| |||| || || | |||||| || ||| Sbjct 11636 AAGCCGTAGAAACACCGCGCCTCCGAGATTTTCACCTCTTGGCAGAATCTCTCAATCAGA 11695 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 ||||| || |||||||||||| |||||||| ||||| || | || ||||| ||| Sbjct 11696 TTTTCATTAACGATGCCGTCGGAGGCGGCGAAGAACGCTAACACGTGGGATATGAAGTAT 11755 Query 17414 TTTTCGTC 17421 | ||||| Sbjct 11756 CTCTCGTC 11763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517454233793640