Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq413 91.5 2e-13 >seq413 Length=1084034 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 54404 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463 |||||||| || || |||| | || || || || || || || |||||||| || Sbjct 769419 CTAGACATCTGTTGGTTCTTAGTACAGGCGTTGAACAACGTCGGCGAGGCGTGCGTGAAG 769478 Query 54464 CATTTTTCAGA-AAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAAT 54522 | ||| || ||||| ||||||||| || |||||| || ||||| || ||||| Sbjct 769479 TACCGTTCGGACAAGTA-ATTGTACGTTTCTATAGCTTTATCGATATCATCTTCGTGAAT 769537 Query 54523 TCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTT 54582 || || || || | ||| | ||| ||||||||||| || || |||||| ||| || || Sbjct 769538 GCCGACAGCTACTCTCATCAGCATATGCTGAGGTCTCTCCACTATCTTGCCGTTGATCTT 769597 Query 54583 CAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTC 54642 |||| ||| | || | ||||| || || | || ||||| ||||| | || Sbjct 769598 GAGCAGATAGCTCCTCTCGAGCGTTTTGAAGCCGATGTAATTGTAGTTGAAGTCCCTATC 769657 Query 54643 GTAAATAATAACTGAGT 54659 ||| || ||| | |||| Sbjct 769658 GTATATTATAGCGGAGT 769674 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/149 (73%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 53119 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA--AATTCTCCAGACAATACTCTC 53176 ||| || ||| || ||||| ||||| || | ||| ||||| || |||||||| | Sbjct 767552 GGTCAAGTCTCGCAGCAGATGTGGATTGACGA--TGACGAATTCCCCGGACAATACGCGT 767609 Query 53177 CGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCA 53236 | ||| ||||| ||||| ||||| || | ||||| || |||||||| || || || Sbjct 767610 CTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATCTGCGCC 767669 Query 53237 GTTGATGCAGTCGGCATAGGTGCCACCAA 53265 || || |||||||||||||| || | ||| Sbjct 767670 GTCGACGCAGTCGGCATAGGCGCAATCAA 767698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593616785873040