Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq3542 104 4e-17 seq324 104 4e-17 >seq3542 Length=209091 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| ||||||| || |||||||| || || || | || | ||||| | Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| |||| || || ||||| ||||| || || || || ||||| Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || ||||| || || ||||| || || ||| | |||| | || || || Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||||| || | ||||||||| | || | ||||| ||||| Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGCCTTCGAGGAGGTAT 187006 Score = 100 bits (110), Expect = 4e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | ||||| || || || ||||| || || | || | ||||| Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | ||| ||||| || |||||||| || || || || ||||| Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || ||||| || || || || |||| ||| || |||| | |||||| || Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 ||||| || || ||||| ||||||| || || || Sbjct 186827 ATTCAGAAGGAGTCAACACTGCATTTAGTCTTGCG 186793 >seq324 Length=2934362 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || |||||||| || ||| | ||| |||| || | Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | || || || |||||||| ||||| || ||||| || || Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| || || || || || ||||| | || || | || || | || || || Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || ||||||||||| ||||| || | || || ||||| Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGGTAT 1892651 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || || |||||||| ||| | ||| | ||||| Sbjct 1892650 ATGCAGATTTTTGTCAAGACCTTGACTGGTAAAACTATTACTTTGGAGGTCGAAGCGTCG 1892709 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| ||||||||||| ||||| || || ||||| || ||| Sbjct 1892710 GATACCATCGAGAACGTGAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 1892769 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| || || || || || ||||| | ||||| | || || ||| || || || Sbjct 1892770 CAAAGACTGATCTTCGCGGGGAAACAGCTTGAGGACGGGCGTACCTTATCCGACTACAAC 1892829 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || | || |||| | || | ||||| ||||| Sbjct 1892830 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGACTTCGAGGCGGTAT 1892879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755322633686400