Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3542 118 1e-21 seq1825 104 3e-17 seq187 104 3e-17 seq1399 102 9e-17 seq1219 102 9e-17 seq2581 98.7 1e-15 seq616 95.1 1e-14 seq324 91.5 2e-13 seq6244 89.7 6e-13 seq408 86.0 7e-12 >seq3542 Length=209091 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 ||||| || ||||||| ||| |||||| ||||| |||||||| | || || | | Sbjct 186793 CGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCA 186852 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || ||||||||||| || ||||| || || |||||||| || | || | | ||| || Sbjct 186853 TCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTA 186912 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| |||||| ||| | | | | |||||| | ||| || |||| |||||| Sbjct 186913 TCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATG 186972 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| ||||| || ||||| ||||| |||||||| Sbjct 186973 GTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||||| | |||| |||||||| | |||| ||||| || || ||||| || | Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | || || | ||| || |||||||| || || |||||||| || | || Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||| ||||| ||| || || | | | | ||||| | ||| || Sbjct 187129 ATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACT 187188 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| |||||||| ||||| || || ||||||||||| |||||||| Sbjct 187189 TCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 >seq1825 Length=2441592 Score = 104 bits (114), Expect = 3e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1518253 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1518312 Query 60126 TACTACCGAGGATTG 60140 |||||||||||| || Sbjct 1518313 TACTACCGAGGACTG 1518327 >seq187 Length=3222021 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2477577 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2477636 Query 60126 TACTACCGAGGA 60137 |||||||||||| Sbjct 2477637 TACTACCGAGGA 2477648 >seq1399 Length=567641 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 ||| || ||||||| | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 333755 AAAGTTACTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTA 333696 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 333695 ACCACTATACTATCGAGGA 333677 >seq1219 Length=3034181 Score = 102 bits (112), Expect = 9e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 60059 AAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTC 60118 ||| || ||||||| | ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 429231 AAAATTCCTCCTCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTA 429290 Query 60119 ACCACTATACTACCGAGGA 60137 |||||||||||| |||||| Sbjct 429291 ACCACTATACTATCGAGGA 429309 >seq2581 Length=779380 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||| || | ||||||||||||| ||||||||||||||||||||| |||| Sbjct 463911 AAAAAAACTCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 463970 Query 60117 TCACCACTATACTACCGAGGATTG 60140 | |||||||||||| |||||| || Sbjct 463971 TAACCACTATACTATCGAGGAGTG 463994 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 371174 TCTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 371233 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 371234 ATACTATCGAGGA 371246 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 466181 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 466122 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 466121 TACTATCGAGGA 466110 >seq616 Length=1028764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 913920 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 913861 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 913860 TACTATCGAGGA 913849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 914247 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 914306 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 914307 TACTATCGAGGA 914318 >seq324 Length=2934362 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || || ||||| | || || || |||| || || ||||| ||||| || Sbjct 1891700 TCCTTCTGGATGTTATAATCGGACAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAG 1891641 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 ||||| ||||||||||||| || | | || || ||| ||| | || | || | | Sbjct 1891640 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCTTTATCC-TGAATCTTGGCCTTCACGTT 1891582 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || ||| || |||| ||||||||||| ||||| || ||||| || Sbjct 1891581 CTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCAC 1891522 Query 43172 AAAGATTTGCAT 43183 || || ||||| Sbjct 1891521 GAAAATCTGCAT 1891510 >seq6244 Length=2046320 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 ||||||| | |||||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 34913 CTCCTCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAGCCACTA 34854 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 34853 TACTATCGAGGA 34842 >seq408 Length=1748099 Score = 86.0 bits (94), Expect = 7e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 ||||||||||||| || || | || ||| || |||| || | |||||| ||||| || | Sbjct 1304020 CCTTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGA 1304079 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | ||||||||||| || | ||| | | ||||||||| ||| || || | | Sbjct 1304080 TTAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTT 1304139 Query 43114 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 43173 | | |||||| | ||||| || | ||||| ||||| ||||| || || || || | Sbjct 1304140 CGATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGA 1304199 Query 43174 AGATTTGCAT 43183 | || ||||| Sbjct 1304200 AAATCTGCAT 1304209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571716652750440