Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq3542 104 3e-17 seq1673 86.0 9e-12 >seq3542 Length=209091 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||| | | |||||||| | || ||||| || || || || || ||| Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| ||| || || ||||| ||||| ||||||| | ||||||||||||||| Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| ||||| Sbjct 187129 ATTCCCTCTTTGTCTTG 187145 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||| | | |||||||| | || ||||| || || || || || ||| Sbjct 187237 CCTCCTCGAAGACGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187296 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| ||| || || ||||| || || ||||||| | ||||||||||||||| Sbjct 187297 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187356 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| ||||| Sbjct 187357 ATTCCCTCTTTGTCTTG 187373 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||| | | |||| ||| | || ||||| || || || || || ||| Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| ||| || || ||||| || || ||||||| | ||||||||||||||| Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| ||||| ||||| Sbjct 187585 ATTCCCTCTTTGTCTTG 187601 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || | ||||| || || ||||| | || || || || || || ||||||||| Sbjct 186781 CCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAA 186840 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | ||| |||| || || || || ||||||| | ||||||||||||||| Sbjct 186841 AGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 186900 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||| |||||||| || Sbjct 186901 ATTCCCTCTTTATCCTG 186917 >seq1673 Length=623036 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 24036 ACATTTATCAAACCATCTTGCGTGTTGTATCCAAGGATCATCGTCTGTTTCCCATTTATT 24095 ||||||| ||||||| | || || ||| |||||||||||| |||| ||||| | || Sbjct 1323 ACATTTAGAAAACCATTTGGCATGCTGTTCCCAAGGATCATCCTCTGGCTCCCAATCTTT 1382 Query 24096 TAAACCACCATCACAATAAAAGCATTTAACTTTATCACTTTTTCCAGTATAAAAGAATCC 24155 || || || | |||||| ||||| || ||||| ||||| |||||| | ||||| Sbjct 1383 CAATCCGCCTCCGCAATAATAGCATAATGTTTGATCACCATTTCCTGTATAATAAAATCC 1442 Query 24156 AGCTTCTGCTAGTTTTTCTGTAGAAATAGGCATTGAAATAGGCCACTCTTTATATGT 24212 ||| ||| | || || | | |||||||| ||||||||| || | |||| Sbjct 1443 AGCAGTTGCCAATTGCTCCTTGGTTTGTGGCATTGATATAGGCCACATTTCAAATGT 1499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743395139708160