Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq3542 116 2e-21 seq324 104 2e-17 seq408 87.8 1e-12 >seq3542 Length=209091 Score = 116 bits (128), Expect = 2e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || || || | ||| ||||| || | || ||| ||||| |||||||||||||| Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || | | | || |||||||| ||||| |||||||| || |||||||| || || Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||| ||||| ||||| |||| || |||| | ||| | | |||||| Sbjct 187585 ATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGACC 187644 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| || ||||| ||||||||||| ||||| Sbjct 187645 TCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||||| || | | | || |||||||| ||||| ||||| Sbjct 187044 TTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAA 187103 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || |||||||| || || | | ||| ||||| ||||| ||||| || Sbjct 187104 AATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATT 187163 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 |||| | || | | |||||| || | |||||||| ||||| |||||||| || || Sbjct 187164 TTCTATTGTGTCAGAAGCTTCGACTTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTAC 187223 Query 34378 AAAGATCTGCAT 34389 ||| || ||||| Sbjct 187224 AAATATTTGCAT 187235 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||||||||| || | | | || |||||||| ||||| ||||| Sbjct 187272 TTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAA 187331 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||| || |||||||| || || | | ||| ||||| ||||| |||| || Sbjct 187332 AATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATT 187391 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 |||||| || | | |||||| || | || || || ||||| ||||||||||| || Sbjct 187392 TTCTATCGTGTCAGAAGCTTCGACTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGAC 187451 Query 34378 AAAGATCTGCAT 34389 ||| |||||||| Sbjct 187452 AAATATCTGCAT 187463 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || || || | | || || | ||||||||| |||||| Sbjct 186817 TCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAA 186876 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATC 34317 || || |||||||| || || | | ||| || || || ||| ||||| | || Sbjct 186877 ATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGGAT-TTTGGCTTTCACATT 186935 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 |||| | |||| | |||||| || | ||||||||||| || ||||| || ||||| Sbjct 186936 TTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCAC 186995 Query 34378 AAAGATCTGCAT 34389 ||| || ||||| Sbjct 186996 AAATATTTGCAT 187007 >seq324 Length=2934362 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || | || |||||| |||||||| ||||||||||||||| Sbjct 1892648 CCGCCCCGGAGTCGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGAC 1892589 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||| || || ||||| || || | ||||||||| || Sbjct 1892588 AGGGTGCGTCCGTCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGA 1892529 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | || | || | || | | || || Sbjct 1892528 ATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACC 1892469 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||||||||| || | ||| |||||||| |||||||| Sbjct 1892468 TCCAAAGTGATGGTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || ||||| || | ||| ||| ||||| ||||||||||| ||| Sbjct 1892420 CCGCCACGAAGTCGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1892361 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| |||| || | ||| || || || || || | | |||||| || ||| Sbjct 1892360 AGGGTGCGGCCGTCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGG 1892301 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | ||||||||| ||| || ||||| | || | || | |||| | ||||| Sbjct 1892300 ATCCCCTCCTTGTCCTGGATC-TTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGAC 1892242 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| |||||||| |||||||| | ||| |||||||| |||||||| Sbjct 1892241 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || ||||| || | ||| || || || ||||||||||| ||||| ||| | || Sbjct 1891949 AGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 1891890 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || || || || | | |||||| || || | | ||||||||| Sbjct 1891889 TCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCT 1891830 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 |||||| ||||| | || | || | ||||| | ||||| |||| |||||||| Sbjct 1891829 TGGATCTTT-GCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGT 1891771 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| | ||| ||||||||||||||||| Sbjct 1891770 CTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || |||| || |||| ||| | ||| ||| ||||| ||||| || |||||| Sbjct 1891736 CCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGAC 1891677 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | || |||| || | |||||||| || || ||||| |||||||||||| || Sbjct 1891676 AATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGG 1891617 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | || || || ||||| ||| | | | || | |||| || ||| || Sbjct 1891616 ATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACT 1891557 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||||||||| || || || || ||||| || |||||||| Sbjct 1891556 TCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||||||||| | || || ||||| |||||||||||||| Sbjct 1892876 CCGCCTCGAAGTCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAT 1892817 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 | ||| |||| || | ||| || || ||||| || || | || |||||| || Sbjct 1892816 AAGGTACGCCCGTCCTCAAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGG 1892757 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || ||| ||||| || ||| ||||| | | | || | ||| | || |||||| Sbjct 1892756 ATGCCCTCTTTGTCTTGAAT-TTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCGAC 1892698 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || ||||| || || | || || ||||| |||||||| Sbjct 1892697 CTCCAAAGTAATAGTTTTACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 >seq408 Length=1748099 Score = 87.8 bits (96), Expect = 1e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 34202 TTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATG 34261 || || || || |||||||||| ||| |||| |||||||||||||| || || || Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 34262 AGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCT 34321 || |||||||| || || | | |||||||| ||||| ||||| || | Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 34322 ATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAG 34381 || | |||| | || || || | ||||| ||||| || ||||| |||||||| || Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 34382 ATCTGCAT 34389 |||||||| Sbjct 1304202 ATCTGCAT 1304209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323016391534880