Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq559 114 3e-20 seq413 96.9 7e-15 >seq559 Length=892256 Score = 114 bits (126), Expect = 3e-20 Identities = 132/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 || ||||| |||||| || | || |||||||||||||||| |||||| | || |||||| Sbjct 182202 TGCCCGCCATTCAAGATCATCATACTGGACGAGGCGGACAGCATGACTGGCGCCGCGCAA 182143 Query 254262 TCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGC 254321 |||| ||||| || | ||||||| | | || ||||| |||||||||||| Sbjct 182142 ACCGCGCTCCGTCGCATCATGGAGAAAGAAGCGCAAAGCACACGTTTCTGCCTGGTGTGC 182083 Query 254322 AACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||| |||| |||||| || | || ||||| ||| |||||||||| |||| Sbjct 182082 AACTACCTGTCACGTATCATCAAGCCAATAGCGTCTCGTTGCACCAAGTTTCGCTTCA 182025 >seq413 Length=1084034 Score = 96.9 bits (106), Expect = 7e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||||||||| |||| ||||| ||||| || | |||||||| ||||| || | Sbjct 769627 TTCAAAACGCTCGAGAGGAGCTATCTGCTCAAGATCAACGGCAAGATAGTGGAGAGACCT 769568 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTC 248952 ||||| ||| ||||| |||| |||||||| |||||| | ||||| || || | | | Sbjct 769567 CAGCATATGCTGATGAGAGTAGCTGTCGGCATTCACGAAGATGATATCGATAAAGCTATA 769508 Query 248953 GAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAAC 249012 || ||||||| || ||||| | | || || ||| | |||||| | |||||| Sbjct 769507 GAAACGTACAATTACTTGTCCGAACGGTACTTCACGCACGCCTCGCCGACGTTGTTCAAC 769448 Query 249013 GCCGGTAC 249020 ||| |||| Sbjct 769447 GCCTGTAC 769440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073572100963264