Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq324 105 5e-18 seq1673 82.4 6e-11 >seq324 Length=2934362 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 45127 tACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||| ||| || || || ||||| |||||||| ||| || | ||| |||| || Sbjct 1892175 TACCAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCGGACAATGTGCGTCCGTCCTC 1892116 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || ||||| || ||||| ||||||| || ||||| || || | || || |||||| Sbjct 1892115 GAGCTGTTTGCCTGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTG 1892056 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || ||| || | | | | ||||| | |||||||||||| || |||||||| Sbjct 1892055 GATCTTCGCCTTCACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTT 1891996 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || |||| ||||| || || ||||||||| Sbjct 1891995 TCCTGTCAAGGTCTTGACGAAAATTTGCATG 1891965 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 45127 tACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||| ||||| ||| |||||||| ||||||||||| ||| ||| |||| || Sbjct 1892403 TACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTC 1892344 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || ||||| || || || ||||| | ||| || || || || | |||||||||||| Sbjct 1892343 GAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTG 1892284 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 || || || || | | | | |||| |||| ||||||| || || ||||| Sbjct 1892283 GATCTTCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGGTCTT 1892224 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 ||| |||| |||||||||||| || ||||| ||||| Sbjct 1892223 GCCGGTCAAAGTCTTCACAAAAATCTGCATACCGCCTC 1892186 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGT-TCAGTTGGCGATCGTCGTC 45186 |||| ||| || ||| ||||||||| |||||||||||| | || | || |||| || Sbjct 1892858 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGATAAGGTA-CGCCCGTCCTC 1892800 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || ||||| || ||||| |||| | ||||||||||| || | ||||| ||||| Sbjct 1892799 AAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGGATGCCCTCTTTGTCTTG 1892740 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 |||||| || || | | | | | ||| | || ||||||| ||||| || || Sbjct 1892739 AATTTTGGCTTTCACGTTCTCGATGGTATCCGACGCTTCGACCTCCAAAGTAATAGTTTT 1892680 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| ||||| || ||||| Sbjct 1892679 ACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 >seq1673 Length=623036 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 13245 GAGCAGATGGCGGATGCCGGTTTCTTCTACACTGGCTACGGTGACAATACAAAGTGCTTC 13304 ||||| |||| ||| || || | || || || | ||||| | ||| |||| Sbjct 1460 GAGCAATTGGCAACTGCTGGATTTTATTATACAGGAAATGGTGATCAAACATTATGCTAT 1401 Query 13305 TATTGTGACGGCGGATTGAAAGATTGGGAGCCGGAAGATGTACCTTGGGAACAGCATGTA 13364 ||||| | ||||||||||||||||||||||| || |||| |||||||||||||||| Sbjct 1400 TATTGCGGAGGCGGATTGAAAGATTGGGAGCCAGAGGATGATCCTTGGGAACAGCATGCC 1341 Query 13365 AGATGGTT 13372 | |||||| Sbjct 1340 AAATGGTT 1333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395007198051583