Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq324 98.7 8e-16 seq3542 89.7 4e-13 >seq324 Length=2934362 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || || ||||| |||||||||||||||| || || | ||||||| ||||| ||| Sbjct 1892618 GTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCCAGCTGTTTCCCC 1892559 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 || |||| |||||||| || || || | |||||||||||| || | ||| Sbjct 1892558 GCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTATCTTGGATCTTGGCCTTC 1892499 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | ||| ||||||| | ||| || | |||||| ||||||| ||||| || Sbjct 1892498 ACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATGGTTTTGCCCGTCAAAGTC 1892439 Query 18309 TTTACAAAAATTTGCAT 18325 || |||||||| ||||| Sbjct 1892438 TTCACAAAAATCTGCAT 1892422 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || |||| ||||||| || || || ||||| || || ||||||||||| | | Sbjct 1892420 CCGCCACGAAGTCGGAGTACCAGATGCAGAGTGGATTCCTTCTGGATGTTGTAGTCAGAC 1892361 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||| | ||||| || ||| |||| | ||| || |||||| ||| Sbjct 1892360 AGGGTGCGGCCGTCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCCGGGGGG 1892301 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || || | | || ||||| | | | ||||| || |||| Sbjct 1892300 ATCCCCTCCTTGTCCTGGATCT-TCGCTTTGACATTCTCGATGGTGTCGGAGGCCTCGAC 1892242 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | ||||||||||| || || |||||||| ||||| Sbjct 1892241 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAAATCTGCAT 1892194 >seq3542 Length=209091 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | || |||| |||||||| ||||| || || ||||||||||||| Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | | ||||||||| |||||||| || | || || | || |||||| || Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | || || || || || | ||| || | | | | |||||| | ||| | Sbjct 187129 ATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACT 187188 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | ||||| || | || |||||||| |||||||| Sbjct 187189 TCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379278705769635