Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3542 89.7 4e-13 seq324 87.8 2e-12 >seq3542 Length=209091 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24831 CATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAG 24890 ||||||||||||||| ||||| | || ||||| || || || |||| |||||| | Sbjct 187464 CATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTC 187405 Query 24891 CGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCA 24950 |||| |||||| ||| || | || || | ||||| || | || || || Sbjct 187404 TGACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCA 187345 Query 24951 GCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAG 25010 ||| ||| | || | || |||||||| |||||||| || ||| | ||| |||| Sbjct 187344 GCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAA 187285 Query 25011 CATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 ||| ||||| || |||| |||||||| || | || | || |||||| Sbjct 187284 CATCCAGAAGGAATCCACACTTCATTTGGTTCTGCGTCTTCGAGGAGGT 187236 >seq324 Length=2934362 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || || ||||| || || || || || || | || ||||| | | Sbjct 1892878 ATGCAGATCTTCGTCAAGACCTTGACGGGGAAGACTATCACGTTGGAGGTCGAGGCCTCC 1892937 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | || | || |||| || ||| | ||||||||| | || ||||||| Sbjct 1892938 GACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGCATTCCACCTGACCAG 1892997 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||| | ||||| | |||||||||||||| || || || || |||||||| | Sbjct 1892998 CAAAGGTTAATCTTCGCGGGCAAACAACTCGAGGACGGGCGCACCTTGTCCGATTACAAC 1893057 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || |||||||| |||||||||| Sbjct 1893058 ATCCAGAAAGAATCCACGCTTCA 1893080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418231999816160