Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq324 141 8e-29 seq5802 131 1e-25 seq413 129 5e-25 seq3542 125 6e-24 seq408 116 3e-21 >seq324 Length=2934362 Score = 141 bits (156), Expect = 8e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| ||||| || ||||| |||||| |||| |||||| |||| Sbjct 1891509 CATGCAGATTTTCGTGAAGACACTGACGGGGAAAACCATCACCCTCGAAGTTGAAGCGTC 1891568 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | || || | || ||| || ||||| | || |||||||| Sbjct 1891569 CGACACTATCGAGAACGTGAAGGCCAAGATTCAGGATAAAGAAGGGATCCCACCCGACCA 1891628 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || || |||||||| || | || ||| || || ||||||||| Sbjct 1891629 GCAGCGTCTCATCTTTGCTGGCAAGCAACTCGAGGACGGACGCACATTGTCCGATTATAA 1891688 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || ||||| |||||||| | || | ||||| Sbjct 1891689 CATCCAGAAGGAATCTACCCTTCACTTGGTACTTCGGCTTCGAGGCGG 1891736 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||||||||| ||||| ||||||| || |||||||| | || || || | || Sbjct 1891965 CATGCAAATTTTCGTCAAGACCTTGACAGGAAAGACGATCACTTTGGAGGTGGAGGCTTC 1892024 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || || |||||| |||||| | || || ||||| Sbjct 1892025 GGACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAAGAAGGCATTCCACCTGACCA 1892084 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| | | || ||||| ||||||||| | || ||| || || |||||| || Sbjct 1892085 GCAAAGGTTGATCTTCGCAGGCAAACAGCTCGAGGACGGACGCACATTGTCCGATTACAA 1892144 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || |||||||| || ||||| ||||||||| |||| | ||||||| Sbjct 1892145 CATCCAGAAAGAATCTACCCTTCACCTGGTACTTCGACTTCGAGGCGGTA 1892194 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||| ||||| || ||||| | || || || | ||| Sbjct 1892194 ATGCAGATTTTTGTGAAGACTTTGACCGGCAAGACCATCACATTGGAGGTCGAGGCCTCC 1892253 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | |||||| || || ||||||||| || | || || || ||| Sbjct 1892254 GACACCATCGAGAATGTCAAAGCGAAGATCCAGGACAAGGAGGGGATCCCCCCGGATCAG 1892313 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||| |||||| | |||||| || || || || ||| Sbjct 1892314 CAGAGATTGATCTTTGCTGGGAAACAGCTCGAAGACGGCCGCACCCTGTCTGACTACAAC 1892373 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| ||||| ||||||||||| |||| | ||||||| Sbjct 1892374 ATCCAGAAGGAATCCACTCTGCATCTGGTACTCCGACTTCGTGGCGGTA 1892422 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||| |||| |||||||| ||||| | || ||||| | || Sbjct 1892422 ATGCAGATTTTTGTGAAGACTTTGACGGGCAAAACCATCACTTTGGAGGTTGAGGCTTCT 1892481 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || || | || || ||||||||| | || ||||||||| Sbjct 1892482 GACACTATTGAAAATGTGAAGGCCAAGATCCAAGATAAGGAAGGCATTCCACCCGACCAG 1892541 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | || || ||||| || |||||| |||||||| || || ||| || ||| Sbjct 1892542 CAAAGACTGATCTTCGCGGGGAAACAGCTGGAAGACGGACGCACCCTGTCCGACTACAAC 1892601 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||| || ||| | ||| | || | |||| ||||||||| Sbjct 1892602 ATTCAGAAAGAGTCTACTTTGCATTTAGTTTTGCGACTCCGGGGCGGTA 1892650 >seq5802 Length=86632 Score = 131 bits (144), Expect = 1e-25 Identities = 165/224 (74%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 57879 CTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAA 57937 |||||||| || |||||||| ||||| ||| |||| ||||| || | ||| | | || Sbjct 10896 CTGTTCAATGCAATCGAAACTTTGCCCTGCG-TCGCGAAGAAAGCCAATTGGGCGTTGAA 10838 Query 57938 ATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 ||||| || || | || |||||| | || | ||||||||||||| || ||||| Sbjct 10837 TTGGATCAATCACGATAGTGCAACGTTCCCGGAACGTGTAATCGCGTTCGCTGCGGTCGA 10778 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 || ||||| || ||||| || || || || || ||| ||||||| || || |||| Sbjct 10777 GGGAATATTTTTCAGCGGCAGTTTCGCCGCCATTTTCTGGCTGAAGAAGCGAGGAGTGAT 10718 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 ||| || || ||||| ||||||||| | || ||||| ||||||| Sbjct 10717 GCCGGGTCTCACGTTCAGCAACGAGCTTATTTCGCGAGACGAGG 10674 >seq413 Length=1084034 Score = 129 bits (142), Expect = 5e-25 Identities = 192/268 (72%), Gaps = 11/268 (4%) Strand=Plus/Plus Query 22411 GTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA--AAC 22468 || ||||||||| | |||||| ||| | |||||| | || || | ||| || Sbjct 767534 GTCCCACAAACCTCGAGTGGTCAAGTCTCGCAGCAGATGTGGATTGACGA--TGACGAAT 767591 Query 22469 TCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTG 22528 || |||||||| ||||| | ||| || ||| ||| |||| |||| || || ||| Sbjct 767592 TCCCCGGACAATACGCGTCTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTG 767651 Query 22529 TTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTC 22588 ||||||| ||||| || ||||| || |||||||| ||||| | || || || |||||| Sbjct 767652 TTTCCCAAGATCTGCGCCGTCGACGCAGTCGGCATAGGCGCAATCAAGAGGGAATTTCTC 767711 Query 22589 AAGCCGTGCTTTGAAATTTTACTCTTGAG--CATCGACCAGTCCCACAGATCGGACGGCG 22646 | |||||||| | ||||| ||| | |||| ||||||||||| ||| | |||| Sbjct 767712 ACCCCGTGCTTCGCGATTTTCGCCTTCAATTCATC--CCAGTCCCACAAATCCGTCGGCT 767769 Query 22647 TCACATTGTCCCACATATCGTATTGCAA 22674 | || || |||||| ||||||||||| Sbjct 767770 TAACGTT---CCACATGTCGTATTGCAA 767794 Score = 116 bits (128), Expect = 3e-21 Identities = 180/257 (70%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 23006 ACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTG 23065 || ||| |||| |||||||| || || | |||||| ||||| || || || | | | Sbjct 768303 ACGAACATGTTAACGGCGATAGATGCTAAATTGCACACGGCGACTTCCTCCGGGCTGGAG 768362 Query 23066 TACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTG 23125 ||||| | || ||||| || | |||||| || || |||||||||| | || || Sbjct 768363 TACTCGATAACCTCGGTGCACAAATTGCTGCATTTGATCGTGCCCAGGTGTTGATGATTC 768422 Query 23126 CTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGAC 23185 ||| |||||||| ||| ||||||||||| |||||||| || ||||| ||||||||| Sbjct 768423 GATTTGCGATTGCAGTGATCTTTGTAGAGCATATACGGCGTCCCGGTCTCCACCTGCGAC 768482 Query 23186 TCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTACCTGCCTTCTTCC 23245 || || || |||||| || | || | || || | ||| | || |||| | Sbjct 768483 CTGAGAATGGCGAGCCACACAGCCCTGGCTTCCACCTGTTTCTTGTAACGACCCTCTTTC 768542 Query 23246 TCGTACTTTTGGTACAA 23262 |||||| | ||||| || Sbjct 768543 TCGTACCTATGGTAAAA 768559 Score = 104 bits (114), Expect = 2e-17 Identities = 132/179 (74%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 22689 CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCT 22748 |||| || || ||||| || ||||| | || | | |||||| | ||||| || |||| Sbjct 767890 CCGGACTACCCTCGTATGTCTCGTAGGTGCCCTTTTCCGCGGCCAACTCGCAACTGGCCT 767949 Query 22749 CCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGC 22808 |||| ||||||||||| | ||||||||||| || |||| | || || | || Sbjct 767950 CCAAGGCGCCGTAATAAAGCGTCTCGAAGATCTTGATGTTGAGCTCCTTCGCCTCCTTGC 768009 Query 22809 TTTCGTACGGCATA-CGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACC 22866 | ||| |||| ||| ||||||| || |||||||||||||| ||| || | ||| ||||| Sbjct 768010 TCTCGAACGG-ATATCGCATCAACAGGAACGCGTCCGCCAGACCTTGTATGCCGATACC 768067 Score = 91.5 bits (100), Expect = 1e-13 Identities = 167/242 (69%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 23752 GAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCG-ACATTAGATTGTACGTGTCGA 23810 ||||| ||||| ||||||||| ||||| || |||| ||| ||||||||| || | Sbjct 769451 GAACAACGTCGGCGAGGCGTGCGTGAAGTA-CCGTTCGGACAAGTAATTGTACGTTTCTA 769509 Query 23811 TGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAG 23870 | || ||| || || ||| |||| || |||| || || | ||||| ||| | |||| Sbjct 769510 TAGCTTTATCGATATCATCTTCGTGAATGCCGACAGCTACTCTCATCAGCATATGCTGAG 769569 Query 23871 GTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATC 23930 ||||||| || | |||||| || |||| |||||| | | | |||||| || | Sbjct 769570 GTCTCTCCACTATCTTGCCGTTGATCTTGAGCAGATAGCTCCTCTCGAGCGTTTTGAAGC 769629 Query 23931 CAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAAACGGTACGCAT 23990 | | || | ||||| ||||| | ||||| | ||| || || | || | | ||||| Sbjct 769630 CGATGTAATTGTAGTTGAAGTCCCTATCGTATATTATAGCGGAGTCTAATCTCTCCGCAT 769689 Query 23991 TG 23992 || Sbjct 769690 TG 769691 >seq3542 Length=209091 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || ||||||||||| |||||||| || |||||| |||| || ||| | || Sbjct 187235 ATGCAAATATTTGTAAAGACTCTCACAGGCAAGACCATCACCCTCGAAGTCGAAGCTTCT 187176 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || || | || ||||| || || | || || || ||| Sbjct 187175 GACACAATAGAAAATGTAAAGGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCAG 187116 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||||||||||||||| | ||| | ||| || ||| Sbjct 187115 CAGCGTCTGATTTTCGCTGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAAC 187056 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| || |||||| |||| || Sbjct 187055 ATCCAGAAGGAATCCACACTTCATTTGGTTCT 187024 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| || || |||||||| |||||||| || ||||| |||| || ||| | || Sbjct 187692 CATGCAAATCTTTGTGAAGACTCTTACAGGCAAGACCATCACTCTCGAGGTCGAAGCTTC 187633 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | |||| || ||| | || ||||| || || | || || || || Sbjct 187632 TGATACAATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCA 187573 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||||||||||||||| | ||| | ||| || || Sbjct 187572 GCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAA 187513 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || ||||||||||| || Sbjct 187512 CATCCAGAAGGAATCCACGCTTCATCTGGTTCT 187480 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || || ||||| |||||||| || || || |||| || ||| | || Sbjct 187464 CATGCAGATATTTGTCAAAACTCTCACAGGCAAGACTATTACTCTCGAAGTCGAAGCTTC 187405 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || ||| | || ||||| || || | || || || || Sbjct 187404 TGACACGATAGAAAATGTAAAAGCCAAGATCCAAGACAAAGAGGGAATTCCTCCGGATCA 187345 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||||||||||||||| | ||| | ||| || || Sbjct 187344 GCAGCGTCTGATTTTCGCCGGCAAACAGTTGGAAGATGGCAGAACTCTTTCCGACTACAA 187285 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| || |||||| |||| || Sbjct 187284 CATCCAGAAGGAATCCACACTTCATTTGGTTCT 187252 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| || || || ||||| |||||| |||| || ||| | ||| Sbjct 187007 ATGCAAATATTTGTGAAGACCCTCACGGGTAAAACCATCACCCTCGAAGTCGAAGCTTCC 186948 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| ||| || || || | || || || ||| Sbjct 186947 GACACAATAGAAAATGTGAAAGCCAAAATCCAGGATAAAGAGGGAATTCCTCCGGATCAG 186888 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| ||||| ||| | ||||| || || | ||||| ||| Sbjct 186887 CAGCGTCTGATTTTCGCCGGCAAGCAGCTAGAAGATGGTAGAACCCTTTCAGATTACAAC 186828 Query 31373 ATTCAAAAAGAATCGACTCTTCAT 31396 ||||| || || || || || ||| Sbjct 186827 ATTCAGAAGGAGTCAACACTGCAT 186804 >seq408 Length=1748099 Score = 116 bits (128), Expect = 3e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| || || || || || |||||||||||| | || || || | || Sbjct 1304210 CATGCAGATTTTCGTGAAAACCCTCACGGGTAAAACGATCACCCTTGAGGTGGAGGCATC 1304151 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||||| || || | || |||||||||||| | ||||| || || Sbjct 1304150 CGACACAATCGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTCCGCCTGATCA 1304091 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| ||||| || |||||||| |||||||| ||| ||| || ||| ||||| Sbjct 1304090 GCAGCGACTAATCTTTGCTGGCAAGCAGTTGGAGGACGGACGTACTTTGTCCGACTATAA 1304031 Query 31372 CATTCAAAA 31380 |||||||| Sbjct 1304030 TATTCAAAA 1304022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445687705514160