Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq153 98.7 2e-15 >seq153 Length=313700 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 35525 CCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCT 35584 |||||||| ||| | || || ||| | || |||||||| | ||| ||| ||||| Sbjct 253098 CCAGATGACAGACGTATTATAATGTCTGCTTGGAATCCAACTGATATTCCAAAAATGGCG 253157 Query 35585 CTTCCTCCATGCCACATGACTGCTCAA-TTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 | || ||||| |||| | | || | ||||||||| ||||||||||||||| | || Sbjct 253158 TTGCCACCATGTCACA-GTTTCATCCAGTTTTATGTGAATAATGGAGAATTGTCTGGGCA 253216 Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703 | | ||||| |||| | |||| | || ||||| || || || || || ||||| || || Sbjct 253217 GCTTTATCAAAGAAGTGCAGATATGGGTTTGGGAGTACCGTTTAACATAGCATCGTATTC 253276 Query 35704 TCTTCTGACTCATCTGATGGC 35724 | | |||| | || |||| || Sbjct 253277 TTTGCTGATTTATATGATCGC 253297 Score = 93.3 bits (102), Expect = 8e-14 Identities = 160/230 (70%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 35223 TTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGT 35282 ||||| | || || || |||| | | || |||| || ||| || || || | | ||||| Sbjct 252635 TTCCATTACTGACAACTAAGAGAGTATTTTGGAAAGCAGTGGTTGAGGAGTTGTTGTGGT 252694 Query 35283 TCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACG 35342 |||||| || ||| | | |||| ||| | || || ||||||||||| | | Sbjct 252695 TCATCAAAGGATCGACAAATTCTAAAGTATTAACAAACAAAGGTGTACACATCTGGGATG 252754 Query 35343 CTAATGGGTCGCGGGAATTTTTGGA---CAGTAGAGGGTTATAC-GATAGAGCAGAGGGA 35398 ||||| || || | || ||||| | || |||| || ||||||| ||| || Sbjct 252755 AGAATGGTTCACGTGCCTTCTTGGATTCCTGT----GGTTTCACTGATAGAGAAGAAGGT 252810 Query 35399 GATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATA 35448 ||||||||||| | || |||||||||||| | |||| ||||||||||| Sbjct 252811 GATTTGGGACCTATCTATGGATTCCAATGGAGACATTACGGTGCTGAATA 252860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989404933847465