Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq590 89.7 6e-13 seq413 84.2 3e-11 >seq590 Length=2706923 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 |||| || | ||| || |||||||| || || || |||||||| ||||| | |||| | Sbjct 2570815 CACTGAAAACTTTCTTCGTTTCCTTATGCAGGTTGGATATGGCAATTCTTCCTGCTAAAG 2570756 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGCCAGAGTGTCC 64124 | |||||||| |||| || | | || | | ||||| || || || |||| ||||||| Sbjct 2570755 TCTCATAATCCTGATGCTGATT-GACCATGCTTGCTGCAATATCAGCCGCCAAAGTGTCC 2570697 Query 64125 AATTCTACCGTTGTTACTCCA 64145 ||||| |||||||| | |||| Sbjct 2570696 AATTCAACCGTTGTCATTCCA 2570676 >seq413 Length=1084034 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 62357 GGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCG 62416 ||| || ||| || ||||| || || || | |||||| || |||||||| | | Sbjct 767552 GGTCAAGTCTCGCAGCAGATGTGGATTGACGATGACGAATTCCCCGGACAATACGCGTCT 767611 Query 62417 AGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGT 62476 ||| ||||| ||||| ||||| || | ||||| || |||||||| || || || || Sbjct 767612 CACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATCTGCGCCGT 767671 Query 62477 TGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTT 62536 || |||||||||||||| || | ||| | |||||| | |||| | |||||| Sbjct 767672 CGACGCAGTCGGCATAGGCGCAATCAAGAGGGAATTTCTCACCCCGTGCTTCGCGATTTT 767731 Query 62537 ATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGG 62572 | || | | ||||| | ||| | ||||| ||| Sbjct 767732 CGCCTTCAATTCATCCCAGTCCCACAAATCCGTCGG 767767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629706413575440