Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq324 122 9e-23 seq3542 105 7e-18 seq408 100 3e-16 >seq324 Length=2934362 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 |||||||| | || | || | ||||| ||||| ||||| || ||||| |||||| | Sbjct 1892192 CCGCCTCGAAGTCGAAGTACCAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCGGAC 1892133 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||| ||||||||||| || || |||||| | |||||| || || || Sbjct 1892132 AATGTGCGTCCGTCCTCGAGCTGTTTGCCTGCGAAGATCAACCTTTGCTGGTCAGGTGGA 1892073 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| ||| || || | | || | ||||| | | ||||||| Sbjct 1892072 ATGCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCCGAAGCCTCCACC 1892013 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | |||||| || ||||| || || ||||| |||||||| Sbjct 1892012 TCCAAAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAAATTTGCAT 1891966 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | ||||||||||| || | ||||||||||| |||||||| || ||| | Sbjct 1892648 CCGCCCCGGAGTCGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGAC 1892589 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| |||||||| || || ||||||| | |||||| ||||| || Sbjct 1892588 AGGGTGCGTCCGTCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGA 1892529 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| || || ||| || || | | ||| | ||||| | | ||| ||| Sbjct 1892528 ATGCCTTCCTTATCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACC 1892469 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || ||||| ||||| || || || || || |||||| Sbjct 1892468 TCCAAAGTGATGGTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCATA 1892421 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || |||||||| | ||| | || | || ||||| ||||| ||||| || || Sbjct 1891965 GCCACCACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGA 1891906 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || |||| |||||||||||||| |||||| |||||| | |||||||| ||||| Sbjct 1891905 CAGGGTGCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 1891846 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| ||| ||| | | || | || |||| || ||| || Sbjct 1891845 GATCCCCTCCTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGAC 1891786 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | || | |||||||||||||| || || || || || ||||| Sbjct 1891785 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||||||||| | || | || ||||||| ||||| || || || |||||||||||| Sbjct 1891737 GCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGA 1891678 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || ||||| ||| ||||| || || |||||| |||| ||||| ||||| ||||| || Sbjct 1891677 CAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGG 1891618 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| | || | || | | || | ||||||| | || | Sbjct 1891617 GATCCCTTCTTTATC-CTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAA 1891559 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | ||| | || || || |||| || || ||||| || ||||| Sbjct 1891558 CTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||| || ||||| || ||||| |||||| || |||| | ||| ||||| || Sbjct 1893081 GTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCCTCGAGTTG 1893022 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||| || || |||| | | |||||| || || || |||||||||||||| ||| | | Sbjct 1893021 TTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTC-CTGAATCT 1892963 Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 | | || | | || | ||||||| || ||| ||||| | || | ||||| || | Sbjct 1892962 TCGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTCTTCCCCG 1892903 Query 139740 TCAACGTTTTTACGAATATTTGCATA 139765 |||| || || ||||| || |||||| Sbjct 1892902 TCAAGGTCTTGACGAAGATCTGCATA 1892877 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || || || || || ||||| || || || |||| ||||||||||||||| ||| Sbjct 1892390 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTCGAGCTGTTTCCCA 1892331 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| | |||||||| || || || || || ||||| ||| || ||| Sbjct 1892330 GCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCTTTG 1892271 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||||| || ||| ||||| | || | |||||||||||||| || Sbjct 1892270 ACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGGTCTTGCCGGTCAAAGTC 1892211 Query 139748 TTTACGAATATTTGCATA 139765 || || || || |||||| Sbjct 1892210 TTCACAAAAATCTGCATA 1892193 >seq3542 Length=209091 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | |||| ||| || |||| || || || || || ||||| || ||| Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || ||||| | |||||| ||||| | |||||||| |||||||| ||||| Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || |||||||| ||| || |||| | ||| | |||||| | | || || Sbjct 187129 ATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACT 187188 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | |||||||| || | || ||||| |||||||||||| || Sbjct 187189 TCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCATACCT 187239 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||||| ||||| || | || ||||| || |||||||| ||||| Sbjct 186780 GCCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGA 186839 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || ||||| ||||| || || || | |||||||| |||||||| ||||| Sbjct 186840 AAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 186899 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || ||||| || |||||| ||| | | ||| | |||||||| | || || Sbjct 186900 AATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGAC 186959 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | || || || || | || || || |||||||||||| || Sbjct 186960 TTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCATACCT 187011 >seq408 Length=1748099 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 139577 TTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATC 139636 |||||||| ||||| ||| || || | ||| || | ||| || |||||| |||| Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 139637 AGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCC 139696 || || |||||||| || || || ||||| ||||| ||| || |||| | ||| Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 139697 ACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAAT 139756 | |||||||| | ||||||||||| ||| | ||| || || || | ||||| ||||| Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 139757 ATTTGCAT 139764 || ||||| Sbjct 1304202 ATCTGCAT 1304209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495976426101600