Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq413 87.8 2e-12 seq590 84.2 3e-11 >seq413 Length=1084034 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/161 (73%), Gaps = 4/161 (2%) Strand=Plus/Plus Query 71112 GGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGA--AATTCTCCAGACAATACTCTA 71169 ||| || ||| || ||||| ||||| || | ||| ||||| || |||||||| | Sbjct 767552 GGTCAAGTCTCGCAGCAGATGTGGATTGACGA--TGACGAATTCCCCGGACAATACGCGT 767609 Query 71170 CGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCA 71229 | ||| ||||| ||||| ||||| || | ||||| || |||||||| || || || Sbjct 767610 CTCACGTAGATATTGCTGGTGTACGGCTCGATGGACTCGTTGTTTCCCAAGATCTGCGCC 767669 Query 71230 GTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCT 71270 || || |||||||||||||| || | ||| || |||||| Sbjct 767670 GTCGACGCAGTCGGCATAGGCGCAATCAAGAGGGAATTTCT 767710 >seq590 Length=2706923 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 71376 TCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGC 71435 |||| |||| || || || || || | || ||| | ||| ||||| || ||||| || Sbjct 2572593 TCCTTCATACGTCTCATAAGGCCCATTTTCCATGGCCATTTCGCAACTAGCTTCTAAGGC 2572534 Query 71436 TCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAA 71495 |||||||||| |||||| ||||| | |||||| |||| || || || ||||| Sbjct 2572533 ACCATAATAAAGGGTTTCAAAAATTTGTACATTGAGCTCTTTAGCCTCTTTACTTTCAAA 2572474 Query 71496 TGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACC 71546 |||||| | | | |||||||| || || || || ||||||||||| Sbjct 2572473 TGGATATCTCATTAAGATAAACGCATCCGCCAAGCCCGTTACGCCAATACC 2572423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671020718763480