Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq3542 120 3e-22 seq324 109 6e-19 >seq3542 Length=209091 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 |||||||| | |||| ||| ||||||| ||| ||||| || || |||||||| ||| Sbjct 187009 CCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187068 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | || || ||||| | ||||| ||||| | |||||||| |||||||| ||||| Sbjct 187069 AGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGA 187128 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || || |||||||| || || |||| | ||| | ||||| | | ||| ||| Sbjct 187129 ATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACT 187188 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 || | || | |||||||| || | || ||||| |||||||||||| || Sbjct 187189 TCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCATACCT 187239 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 |||||| || | ||||| |||||||| | ||| || || || || ||||||||||| Sbjct 186780 GCCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGA 186839 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || ||||| || || || || || | |||||||| |||||||| ||||| Sbjct 186840 AAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGG 186899 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || ||||| || ||||| ||| | | ||| | ||||| | | ||| || Sbjct 186900 AATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGAC 186959 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188 ||| | || | || || || || | || || || |||||||||||| || Sbjct 186960 TTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCATACCT 187011 >seq324 Length=2934362 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| ||||||||||| || |||||||||||| || ||||| ||| ||||| ||| Sbjct 1892168 TGAAGGGTAGATTCTTTCTGGATGTTGTAATCGGACAATGTGCGTCCGTCCTCGAGCTGT 1892109 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || || |||||| | |||||| || || || |||||||||||||| || || Sbjct 1892108 TTGCCTGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTC 1892049 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||||||| | || || || | ||| | |||||| || ||| Sbjct 1892048 GCCTTCACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTGTC 1891989 Query 143162 AATGTTTTTACGAATATTTGCAT 143184 || || || ||||| |||||||| Sbjct 1891988 AAGGTCTTGACGAAAATTTGCAT 1891966 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 142970 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 143029 |||||||||||||| | ||||| ||||| || |||||||| ||| || |||| | Sbjct 1892636 CGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCG 1892577 Query 143030 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 143089 ||||| || ||||| || || ||||||| | |||||| ||||| || |||||||| || Sbjct 1892576 TCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTA 1892517 Query 143090 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACC 143149 || || || || | | ||| | ||||| | | || || || | ||| | Sbjct 1892516 TCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATG 1892457 Query 143150 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || ||||| ||||| || || || || || |||||| Sbjct 1892456 GTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCATA 1892421 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || |||||||| || |||||||||||| || |||| | ||| ||||||||| Sbjct 1893080 TGAAGCGTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCCTCGAGTTGT 1893021 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || || || |||| | | |||||| || || || |||||||||||||| ||| || Sbjct 1893020 TTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGAATCTTC 1892961 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | ||||| | || || || || | || | ||||| || ||| Sbjct 1892960 GCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTCTTCCCCGTC 1892901 Query 143162 AATGTTTTTACGAATATTTGCATA 143185 || || || ||||| || |||||| Sbjct 1892900 AAGGTCTTGACGAAGATCTGCATA 1892877 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| || |||||||| | ||| | ||| | || || || ||||| |||||||| || Sbjct 1891965 GCCACCACGTAAACGGAGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGA 1891906 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 || |||| |||||||| ||||| |||||| |||||| | |||||||| ||||| Sbjct 1891905 CAGGGTGCGGCCATCTTCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGG 1891846 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || ||||| || ||| ||| | | || | || || | || || || Sbjct 1891845 GATCCCCTCCTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGAC 1891786 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | || | |||||||||||||| || || || || || ||||| Sbjct 1891785 CTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 82.4 bits (90), Expect = 8e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||| || || |||| ||||||||| ||||| ||| Sbjct 1892390 GTGGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCGTCTTCGAGCTGTTTCCCA 1892331 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 ||| |||||| | |||||||| || || || || || ||||| || || ||| Sbjct 1892330 GCAAAGATCAATCTCTGCTGATCCGGGGGGATCCCCTCCTTGTCCTGGATCTTCGCTTTG 1892271 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | || || || || | || | |||||||||||||| || Sbjct 1892270 ACATTCTCGATGGTGTCGGAGGCCTCGACCTCCAATGTGATGGTCTTGCCGGTCAAAGTC 1892211 Query 143168 TTTACGAATATTTGCATA 143185 || || || || |||||| Sbjct 1892210 TTCACAAAAATCTGCATA 1892193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506924892945360