Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq3542 147 2e-30 seq324 105 5e-18 >seq3542 Length=209091 Score = 147 bits (162), Expect = 2e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| |||||||| ||||| || || || |||||||| ||| ||| |||| | ||||| Sbjct 187026 AACCAAATGAAGTGTGGATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTC 187085 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 || |||||||||||| | |||| ||| || || || |||||||| |||||||| Sbjct 187086 CAACTGTTTGCCAGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCTTG 187145 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||| ||||||| ||||||| || || | ||| || || | ||| ||||| || Sbjct 187146 GATCTTGGCCTTTACATTTTCTATTGTGTCAGAAGCTTCGACTTCGAGGGTGATGGTCTT 187205 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| ||||| |||||||| ||||||||| Sbjct 187206 GCCTGTGAGAGTCTTTACAAATATTTGCATA 187236 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || |||||||| || || || || || || ||||||||||| || |||| | ||| Sbjct 186796 AAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCATCT 186855 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 |||| || ||||| ||| | |||| ||| || || || |||||||| ||||| || Sbjct 186856 TCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTATCC 186915 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 |||||| || ||| ||||||| || ||| | ||| || || | ||| |||||| Sbjct 186916 TGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTT 186975 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || || ||||| ||||||||| Sbjct 186976 TTACCCGTGAGGGTCTTCACAAATATTTGCATA 187008 >seq324 Length=2934362 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 ||||||||||| | || || ||||| || |||||||| ||| || | | ||||| Sbjct 1892633 AAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCT 1892574 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||||| || ||| | |||| | ||| |||||| |||||| ||||| || || Sbjct 1892573 TCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTATCT 1892514 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 || ||| ||| ||| |||| || || || | || || || || || |||||| Sbjct 1892513 TGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATGGTT 1892454 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| ||| || |||||||| |||||| Sbjct 1892453 TTGCCCGTCAAAGTCTTCACAAAAATCTGCATA 1892421 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCG--CGTCTTCTAATT 15218 |||||||| || ||||| || |||||||||||| | ||| || |||| || | | Sbjct 1892168 TGAAGGGTAGATTCTTTCTGGATGTTGTAATCGG--ACAATGTGCGTCCGTCCTCGAGCT 1892111 Query 15219 GTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTT 15278 ||||||| ||| | ||||| | ||| ||||| |||||| ||||||||||| || | Sbjct 1892110 GTTTGCCTGCGAAGATCAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCT 1892051 Query 15279 TGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTG 15338 | ||| || | || ||||| || | || || || || || || || || |||| Sbjct 1892050 TCGCCTTCACGTTCTCGATGGTGTCCGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTG 1891991 Query 15339 TCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || || ||||||||||| Sbjct 1891990 TCAAGGTCTTGACGAAAATTTGCAT 1891966 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 15135 TGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGC 15194 |||||||||| | | | || | ||||| ||||| ||||| || |||||||||||| Sbjct 1893106 TGCCACCTCTAAGGCGAAGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAATCGG 1893047 Query 15195 TTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254 | | | | |||| || | ||||||||| ||| | || || | ||| ||||| || Sbjct 1893046 ACAAGGTGCGCCCGTCCTCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAGGTG 1892987 Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 |||| ||||||||||| ||| || ||| || | || ||||| ||| || | Sbjct 1892986 GAATGCCTTCTTTGTCCTGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGAGGCCTCGA 1892927 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 | || || || || || || || |||| || || || || || |||||| Sbjct 1892926 CCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCATA 1892877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362116860244743