Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq324 89.7 4e-13 seq3542 82.4 6e-11 >seq324 Length=2934362 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||| | || |||||||| || || ||||| || | | || ||||||| Sbjct 1892859 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGCCCGTCCTC 1892800 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 |||||||| ||||| | || ||||| || || || || | |||||||||||| Sbjct 1892799 AAGCTGTTTCCCCGCGAAGATCAGTCTTTGTTGGTCGGGTGGGATGCCCTCTTTGTCTTG 1892740 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG-TTTCGACGGTAATGGTTT 19010 |||||| ||| || | ||| ||||| | | ||| || || | ||||| |||| Sbjct 1892739 AATTTTGGCTTTCACGTTCTCGATGGTATC-CGACGCTTCGACCTCCAAAGTAATAGTTT 1892681 Query 19011 TACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 |||| || || || ||||||||||| ||||| Sbjct 1892680 TACCAGTCAAGGTCTTGACAAAAATCTGCAT 1892650 >seq3542 Length=209091 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 |||| || |||||||| ||||| |||||||| | | ||| | | || || ||||| Sbjct 186805 TGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCATCTTCTAGCTGC 186864 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || || |||| || | |||||||||| || | |||||||| || ||||| Sbjct 186865 TTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGGATTTTG 186924 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 ||| || | | | || ||| || || ||||| ||| ||||||||||| || Sbjct 186925 GCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTACCCGTG 186984 Query 19019 AAAGTTTTGACAAAAATTTGCAT 19041 | || || ||||| |||||||| Sbjct 186985 AGGGTCTTCACAAATATTTGCAT 187007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414501442045462