Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3542 178 3e-39 seq408 136 9e-27 seq324 131 4e-25 seq777 96.9 8e-15 >seq3542 Length=209091 Score = 178 bits (196), Expect = 3e-39 Identities = 192/253 (76%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 104309 GAGTCTTTCCATACTTTATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAG 104366 |||||||| || | ||||| || || |||| || | || || | ||| | ||| | Sbjct 187214 GAGTCTTTACAAA---TATTTGCATACCTCCTCGAAGACGCAGAACCAAATGAAGTGTGG 187270 Query 104367 ATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAA 104426 |||| ||||| || || ||||| || |||||||| || ||||| | ||||| || || | Sbjct 187271 ATTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGA 187330 Query 104427 AAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACAT 104486 |||| || | ||| ||||| ||||| ||||| ||||| || || ||||| |||||||||| Sbjct 187331 AAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACAT 187390 Query 104487 TTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 |||||| || || || ||| || || || ||||||||||| || || || ||||| | Sbjct 187391 TTTCTATCGTGTCAGAAGCTTCGACTTCGAGAGTAATAGTCTTGCCTGTGAGAGTTTTGA 187450 Query 104547 CAAATATCTGCAT 104559 ||||||||||||| Sbjct 187451 CAAATATCTGCAT 187463 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | || || ||||| | || ||||| ||||| || || ||||| Sbjct 187462 ATGCCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCG 187521 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || |||||||| || ||||| | ||||| || || ||||| || | ||| ||||| ||| Sbjct 187522 GAAAGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGA 187581 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || ||||| ||||| || || ||||| |||||||||||||||| ||||| || ||| Sbjct 187582 GGAATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCG 187641 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || ||||| || || ||||| || ||||| Sbjct 187642 ACCTCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCAT 187691 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| ||| | ||| || || |||||||| || || || || || |||||||| |||||| Sbjct 186799 ACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATCTGAAAGGGTTCTACCATCTTCT 186858 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || || || ||||| || | ||| ||||| ||||| ||||| ||||||||||| Sbjct 186859 AGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGAATTCCCTCTTTATCCTGG 186918 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 || || ||||| |||||||||| || ||| || ||| || || || || || || ||| Sbjct 186919 ATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGACTTCGAGGGTGATGGTTTTA 186978 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || |||||||| ||||| Sbjct 186979 CCCGTGAGGGTCTTCACAAATATTTGCAT 187007 Score = 159 bits (176), Expect = 8e-34 Identities = 178/237 (75%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104325 TATTT--ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATT 104382 ||||| || || |||| || | || || | ||| | ||| ||||| ||||| || || Sbjct 186999 TATTTGCATACCTCCTCGAAGGCGCAGAACCAAATGAAGTGTGGATTCCTTCTGGATGTT 187058 Query 104383 ATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTG 104442 ||||| || |||||||| || ||||| | ||||| ||||| ||||| || | ||| || Sbjct 187059 GTAGTCGGAAAGAGTTCTGCCATCTTCCAACTGTTTGCCAGCGAAAATCAGACGCTGCTG 187118 Query 104443 ATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCT 104502 ||| ||||| ||||| ||||| || || ||||| || ||||||||||||| || || Sbjct 187119 ATCCGGAGGAATTCCCTCTTTGTCTTGGATCTTGGCCTTTACATTTTCTATTGTGTCAGA 187178 Query 104503 AGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||| || || || || || ||||| || || || || ||||||||||| ||||| Sbjct 187179 AGCTTCGACTTCGAGGGTGATGGTCTTGCCTGTGAGAGTCTTTACAAATATTTGCAT 187235 >seq408 Length=1748099 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 || |||||||||||||| || | ||| | ||||| || | || || |||||||| ||| Sbjct 1304022 TTTTGAATATTATAGTCGGACAAAGTACGTCCGTCCTCCAACTGCTTGCCAGCAAAGATT 1304081 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 || | ||| |||||||| || |||||||| || ||||| ||||| || ||||||||||| Sbjct 1304082 AGTCGCTGCTGATCAGGCGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCG 1304141 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551 | || ||| | || ||||| || || || || ||||| || || ||||| || || Sbjct 1304142 ATTGTGTCGGATGCCTCCACCTCAAGGGTGATCGTTTTACCCGTGAGGGTTTTCACGAAA 1304201 Query 104552 ATCTGCAT 104559 |||||||| Sbjct 1304202 ATCTGCAT 1304209 >seq324 Length=2934362 Score = 131 bits (144), Expect = 4e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| |||| |||||| | || | |||||||| ||||| || ||||| || Sbjct 1891739 ATGCCGCCTCGAAGCCGAAGTACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCG 1891680 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||||| || ||||| || |||||||| || || | ||| || || || Sbjct 1891679 GACAATGTGCGTCCGTCCTCGAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGT 1891620 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||||||||||||||| || || || || || | || ||| | ||| Sbjct 1891619 GGGATCCCTTCTTTATCCTGAATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCA 1891560 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || || ||||| || || || |||||||| Sbjct 1891559 ACTTCGAGGGTGATGGTTTTCCCCGTCAGTGTCTTCACGAAAATCTGCAT 1891510 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 104329 TATTCCC-CCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGT 104387 |||| || ||||| || | |||||| || || | || ||||||||||| || || || | Sbjct 1893109 TATTGCCACCTCTAAGGCGAAGTACAAGGTGAAGCGTGGATTCTTTCTGGATGTTGTAAT 1893050 Query 104388 CAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAG 104447 | || | || | ||||| || |||||||| || || || |||| ||| || || |||| Sbjct 1893049 CGGACAAGGTGCGCCCGTCCTCGAGTTGTTTGCCCGCGAAGATTAACCTTTGCTGGTCAG 1892990 Query 104448 GAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTT 104507 | || || |||||||| ||||||||||| || || || || || | ||| ||| | | Sbjct 1892989 GTGGAATGCCTTCTTTGTCCTGAATCTTCGCCTTCACGTTCTCGATGGTGTCGGAGGCCT 1892930 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||| | || |||||||| || || | || || || || |||||||| Sbjct 1892929 CGACCTCCAACGTGATAGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 1892878 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || || || || || ||||| || || || | || ||| Sbjct 1891949 AGAACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCT 1891890 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || ||||| |||||||| || | ||||| ||||| ||||| || || || || || Sbjct 1891889 TCGAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCT 1891830 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 || ||||||||||| ||||| || | ||||||| | || ||||| | ||| || ||| Sbjct 1891829 TGGATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGTC 1891770 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || | || || ||||| |||||||| Sbjct 1891769 TTGCCGGTCAAAGTCTTCACAAAGATCTGCAT 1891738 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 |||| ||| || ||||| ||||||||||| || ||||| || || || | |||||||| Sbjct 1892630 ACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCC 1892571 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || ||||| || || || || || || || || || || || || ||||| ||||| || Sbjct 1892570 AGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTTATCTTGG 1892511 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || || |||||||| | || || || || ||||| | || || || || Sbjct 1892510 ATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGATGGTTTTG 1892451 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || | || || ||||| |||||||| Sbjct 1892450 CCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || |||| || | |||||| || || | |||||||||||||| || || || || Sbjct 1892195 ATACCGCCTCGAAGTCGAAGTACCAGGTGAAGGGTAGATTCTTTCTGGATGTTGTAATCG 1892136 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || | || | ||||| || || ||||| || || || || | ||| || || ||||| Sbjct 1892135 GACAATGTGCGTCCGTCCTCGAGCTGTTTGCCTGCGAAGATCAACCTTTGCTGGTCAGGT 1892076 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || |||||||| ||||| ||||| || || || || || | ||| || || || Sbjct 1892075 GGAATGCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTCCGAAGCCTCC 1892016 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| | || || ||||| || || | || || || || || ||||| Sbjct 1892015 ACCTCCAAAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAAATTTGCAT 1891966 >seq777 Length=4062919 Score = 96.9 bits (106), Expect = 8e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 ||||| | ||||||||||| ||||| |||||||| || || || ||||| | |||||| Sbjct 197567 AGTACCAAGTGTAATGTAGACTCTTTTTGAATATTGTAATCTGAGAGAGTCCGGCCGTCT 197626 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCT 104458 || | ||| || |||||||| || | ||||| |||||||| || |||||| Sbjct 197627 TCCAATTGCTTCCCAGCAAAGATCAATCTCTGCTGATCAGGTGGAATTCCT 197677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151190053380084