Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq7833 181 6e-41 seq2149 158 7e-34 >seq7833 Length=4950 Score = 181 bits (200), Expect = 6e-41 Identities = 343/502 (68%), Gaps = 2/502 (0%) Strand=Plus/Minus Query 3629 TATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAG 3688 || ||||| |||||||||||||| || ||||||||||| ||||| | || | ||||||| Sbjct 2211 TACTTTGCGGACGTATGCGCTGGCCCTGGTGGTTTCAGCGAATACGTCTTGTCGAGAAAG 2152 Query 3689 AAATGGAATATCAAAGGTTATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAAC 3748 |||||| || ||||| | ||| | || | | ||||||| || || || || Sbjct 2151 AAATGGCATGCTAAAGGATTTGGGTTCACTCTGAAGAATGAAAATGACTTCAAATTGGAC 2092 Query 3749 -AGATTTTACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGG 3807 || |||| || | || | ||||| || || | ||||||| || | | || Sbjct 2091 GAGTTTTTTGCCGGACCATGCG-AGACTTTCCATCCTTTTTATGGTTCGAAGGAAAACGG 2033 Query 3808 TAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGA 3867 || | || |||| |||||| || ||| | || ||||| ||||| |||| | Sbjct 2032 CGATGTGTATGATTCGGGCCATCAGATAGAATTTAGAGATATGATCATGAAGCATACGTA 1973 Query 3868 AGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAA 3927 | || || ||||| || |||||| | || ||||| ||||| || || || |||||||| Sbjct 1972 TGACAAGGGAGTACACTTCATGATGTCAGATGGTGGTTTCTCTGTGGAAGGCCAAGAAAA 1913 Query 3928 TATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGAT 3987 ||| || || || | ||||| | | || ||||||||||||| || || ||||||| Sbjct 1912 TATACAGGAGATCCTGTCGAAGCGGCTTTACCTGTGTCAATGTTTGATAGCGCTGATGAT 1853 Query 3988 CATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGC 4047 | || |||||||| | || | ||| || || || | ||||| || || || | Sbjct 1852 AGTGAGACCAGGTGGTCACTTCGTAACCAAGTTGTTTGACCTTTTTACGCCGTTCAGCGT 1793 Query 4048 TGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTC 4107 || | || ||||||||||| |||| ||| || | ||||||||||| || | | Sbjct 1792 CGGACTGGTTTATTTGATGTACAGATGTTTCGCAAGTGTCTGTATTTTCAAGCCCAACAC 1733 Query 4108 ATCGCGACCGGCCAATTCTGAA 4129 || |||| |||||||| ||| Sbjct 1732 TTCTAGACCAGCCAATTCCGAA 1711 >seq2149 Length=14561 Score = 158 bits (174), Expect = 7e-34 Identities = 342/508 (67%), Gaps = 3/508 (1%) Strand=Plus/Plus Query 3646 CGCTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGG 3705 |||||| | ||||||||||| ||||| | || | |||||||||||| || ||||| Sbjct 13007 CGCTGGCTCTGGTGGTTTCAGCGAATACGTTTTGTCAAGAAAGAAATGGCATGCTAAAGG 13066 Query 3706 TTATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAACAGATTTTACGATAACTT 3765 | ||| | || | | |||||||||| || || || |||| | || Sbjct 13067 ATTTGGGTTCACTCTGAAGAATGAAAATGATTTCAAATTGGACGAGTTTTTTGCGGACCA 13126 Query 3766 TTCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCACA 3825 | || | || || || | | ||||||| || || | || || | || |||| Sbjct 13127 TGCG-AGACCTTCCAATCTTTTTATGGTTCGAAGGACAACGGCGATGTGTATGATTCGGG 13185 Query 3826 AAATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAAAAG-GTGTACATT 3884 |||||| || ||| | || ||||| ||||| |||| | | | ||| | ||||| | Sbjct 13186 TCATCAGATAGAATTTAGAGATATGATAATGAAGCATAC-GTATAACAAGAGAGTACACT 13244 Query 3885 TTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTAT 3944 | |||||| | || ||||| ||||| || || || ||||||||||| | ||||| || | Sbjct 13245 TCATGATGTCAGATGGTGGTTTCTCTGTGGAAGGCCAAGAAAATATATAGGAAATCTTCT 13304 Query 3945 CGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTC 4004 |||| | | || ||||||||||||| || || || ||||| | || ||||| | Sbjct 13305 CGAAGCGGCTCTACCTGTGTCAATGTTTGATAGCGTTTATGATAGTGAGACCAGGTGGAC 13364 Query 4005 ATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGA 4064 | | ||| | ||| || || || | ||||| || ||||| | || | || ||||| | Sbjct 13365 ACTTTGTAACCAAGTTGTTTGACCTGTTTACGCCGTTTAGGGTCGGACTGGTTTATTTAA 13424 Query 4065 TGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATT 4124 |||| |||| ||| || | ||||||||||| || | | || |||| ||||||| Sbjct 13425 TGTACAGATGTTTCGCAAGTGTCTGTATTTTCAAGCCCAACACTTCTAGACCAGCCAATT 13484 Query 4125 CTGAAAGATATTTGGTGTGTTTGAGCAA 4152 | ||| | || ||| | ||| ||| || Sbjct 13485 CCGAACGCTACTTGATATGTAAGAGAAA 13512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276505998470869