Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq324 123 2e-23 seq3542 100 3e-16 >seq324 Length=2934362 Score = 123 bits (136), Expect = 2e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| |||| ||| || |||||||| | ||| || || || ||| | ||| || Sbjct 1891946 ACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTCG 1891887 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 |||||||| || ||||||| ||||| |||||||||||||| || || || ||||| | Sbjct 1891886 AGCTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGAGGGATCCCCTCCTTGTCTTGG 1891827 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || ||||| ||||| ||| || || | | ||||| || | |||||||| || Sbjct 1891826 ATCTTTGCTTTGACATTCTCGATGGTATCGGAGGCCTCGACCTCCAATGTGATGGTCTTG 1891767 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || | ||| ||||||||||||||||||| Sbjct 1891766 CCGGTCAAAGTCTTCACAAAGATCTGCATGC 1891736 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 |||||| || || ||||||||||| || || || | ||| || ||| || ||| Sbjct 1892637 TCGCAAAACTAAATGCAAAGTAGACTCTTTCTGAATGTTGTAGTCGGACAGGGTGCGTCC 1892578 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 || ||||||||||| || | ||||| | ||||||||| || || ||||| ||||| || Sbjct 1892577 GTCTTCCAGCTGTTTCCCCGCGAAGATCAGTCTTTGCTGGTCGGGTGGAATGCCTTCCTT 1892518 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | | |||||||| || || || | ||||| Sbjct 1892517 ATCTTGGATCTTGGCCTTCACATTTTCAATAGTGTCAGAAGCCTCAACCTCCAAAGTGAT 1892458 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||| || || | ||| |||||||| |||||||| Sbjct 1892457 GGTTTTGCCCGTCAAAGTCTTCACAAAAATCTGCAT 1892422 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | ||||||||||| || | |||||||||| || ||| ||||| Sbjct 1891718 ACCAAGTGAAGGGTAGATTCCTTCTGGATGTTATAATCGGACAATGTGCGTCCGTCCTCG 1891659 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 || || || || ||||||| | | ||||| || || || || |||||||| || | | Sbjct 1891658 AGTTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCGGGTGGGATCCCTTCTTTATCCTGA 1891599 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| ||| |||||| | || || || | ||||||||||| Sbjct 1891598 ATCTTGGCCTTCACGTTCTCGATAGTGTCGGACGCTTCAACTTCGAGGGTGATGGTTTTC 1891539 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || || || ||||| || ||||||||| Sbjct 1891538 CCCGTCAGTGTCTTCACGAAAATCTGCATG 1891509 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || ||||| || || | ||| |||||| || ||| ||||| || ||||| || Sbjct 1893074 GTGGATTCTTTCTGGATGTTGTAATCGGACAAGGTGCGCCCGTCCTCGAGTTGTTTGCCC 1893015 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | |||||||| |||||||| || || ||||| ||||||||||| | ||| || ||||| Sbjct 1893014 GCGAAGATTAACCTTTGCTGGTCAGGTGGAATGCCTTCTTTGTCCTGAATCTTCGCCTTC 1892955 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| ||| ||||| | | ||||| || | |||||| || || || || | || Sbjct 1892954 ACGTTCTCGATGGTGTCGGAGGCCTCGACCTCCAACGTGATAGTCTTCCCCGTCAAGGTC 1892895 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 1892894 TTGACGAAGATCTGCAT 1892878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || |||| | ||| | |||| ||| | |||||||| || || | Sbjct 1892205 AAAAATCTGCATACCGCCTCGAAGTCGAAGTACCAGGTGAAGGGTAGATTCTTTCTGGAT 1892146 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| |||||| || ||| ||||| |||||||| || | ||||| || ||||| Sbjct 1892145 GTTGTAATCGGACAATGTGCGTCCGTCCTCGAGCTGTTTGCCTGCGAAGATCAACCTTTG 1892086 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| || || ||||| ||||||||||| | || || ||||| ||| ||| ||||| Sbjct 1892085 CTGGTCAGGTGGAATGCCTTCTTTGTCCTGGATCTTCGCCTTCACGTTCTCGATGGTGTC 1892026 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || | ||||| || ||||| || | || || || || || ||||| Sbjct 1892025 CGAAGCCTCCACCTCCAAAGTGATCGTCTTTCCTGTCAAGGTCTTGACGAAAATTTGCAT 1891966 Query 95008 GC 95009 || Sbjct 1891965 GC 1891964 >seq3542 Length=209091 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||||| | |||| |||| || | || |||||||| || | ||| || ||| Sbjct 187465 CCTCCTCGAAGACGCAGAACCAGATGAAGCGTGGATTCCTTCTGGATGTTGTAGTCGGAA 187524 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| |||| |||||| ||| | || || | | |||||||| |||||| Sbjct 187525 AGAGTTCTGCCATCTTCCAACTGTTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAGGA 187584 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | || || || || || | | || |||| ||||| Sbjct 187585 ATTCCCTCTTTGTCTTGGATCTTGGCTTTTACATTTTCTATTGTATCAGAAGCTTCGACC 187644 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || | |||||||| || || |||||||| ||||||||||| |||||| Sbjct 187645 TCGAGAGTGATGGTCTTGCCTGTAAGAGTCTTCACAAAGATTTGCATG 187692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| | | |||||| || || |||| || || ||||| || | ||| ||||| | Sbjct 186781 CCTCCACGAAGTCGCAAGACTAAATGCAGTGTTGACTCCTTCTGAATGTTGTAATC--TG 186838 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || ||| | ||| || ||||| || ||| | || || | | |||||||| |||| Sbjct 186839 AAAGGGTTCTACCATCTTCTAGCTGCTTGCCGGCGAAAATCAGACGCTGCTGATCCGGAG 186898 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| || ||||| || | ||||| || || || | | ||||| | |||| Sbjct 186899 GAATTCCCTCTTTATCCTGGATTTTGGCTTTCACATTTTCTATTGTGTCGGAAGCTTCGA 186958 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||||||||| || || || || |||||||| || ||||| Sbjct 186959 CTTCGAGGGTGATGGTTTTACCCGTGAGGGTCTTCACAAATATTTGCAT 187007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448212059792280