Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dinoponera_20quadriceps_20[refseq_20GCF_5F001313825.1_202015-10-13] 14,123 sequences; 259,665,865 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2366 203 5e-48 seq1634 188 1e-43 seq9308 168 1e-37 >seq2366 Length=2014639 Score = 203 bits (224), Expect = 5e-48 Identities = 177/220 (80%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| ||||||||||| || ||||||||||| || ||||||||||| ||||||||||| Sbjct 1140370 TCTTCGCGATAACATCCAGGGTATCACCAAGCCGGCCATCCGTCGTCTCGCTCGTCGTGG 1140311 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || || ||| |||| || ||| |||| || |||| ||| | ||| ||||| | || Sbjct 1140310 CGGTGTGAAACGTATCTCCGGCTTGATCTACGAGGAGACTCGCGGTGTGCTGAAGGTGTT 1140251 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 |||| | | ||| |||| |||||| || ||| ||||||||||| ||||| ||||| || Sbjct 1140250 CCTCGAAAACGTCATCCGTGATGCCGTCACCTACACCGAGCACGCAAAACGGAAGACCGT 1140191 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 |||| ||||||| |||| || || |||||||| |||||| Sbjct 1140190 CACCGCCATGGACGTCGTGTACGCCTTGAAACGCCAAGGC 1140151 Score = 172 bits (190), Expect = 9e-39 Identities = 203/271 (75%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | | |||| || |||||||||||||| |||||||| |||||||| Sbjct 2013208 GCGAAGCGTCACAGGAAAG-TCTTGCGTGATAACATCCAAGGTATCACCAAACCAGCTAT 2013266 Query 16492 CCGTCGTCTGGCTCGTCGTG--GTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAG 16549 ||||||||||| | || | |||| || ||||| ||||||||||| | ||||| ||| Sbjct 2013267 TCGTCGTCTGGCGAGGCGAGAGGTGGTGTGAAGCGAATCTCTGGATTGATATATGAGGAG 2013326 Query 16550 ATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 | ||| | ||| |||||| | ||||| ||| || || | || ||| || ||| || Sbjct 2013327 ACTCGAGGTGTATTGAAGGTGTTCCTTGAGAATGTCATTCGCGACGCTGTCACCTACACT 2013386 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||||||||| | ||||| || || | ||||| |||||||||| |||| || ||| Sbjct 2013387 GAGCACGCTAAAAGGAAGACAGTTACTGCTATGGACGTCGTCTATGCCCTGAAGCGACAA 2013446 Query 16670 GGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 || | | | || |||||||| |||||| Sbjct 2013447 GGAAGAACCTTGTACGGTTTTGGCGGTTAAT 2013477 >seq1634 Length=549241 Score = 188 bits (208), Expect = 1e-43 Identities = 202/267 (76%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||||| ||||||||||| || ||||||||||| || ||| Sbjct 436347 GCGAAGCGGCATCGCAAAGTACTTCGTGATAACATCCAGGGTATCACCAAGCCCGCCATC 436406 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || ||||||||||| |||||||| |||| || ||| |||| ||||||| Sbjct 436407 CGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGCATCTCCGGCTTGATCTACGAAGAGACA 436466 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | ||| | || | |||||| ||| ||| || | ||| ||| || || |||||| Sbjct 436467 CGCGGTGTCCTCAAAGTATTCCTCGAGAACGTGATTCGTGACGCTGTCACATACACCGAG 436526 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| || ||| ||||||| | ||||| || | ||||||||||| Sbjct 436527 CACGCCAAGAGGAAGACCGTGACCGCCATGGACGTTGTCTACGCTCTCAAACGTCAAGGA 436586 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 436587 AGAACCCTCTATGGTTTCGGCGGTTAA 436613 >seq9308 Length=2452 Score = 168 bits (186), Expect = 1e-37 Identities = 183/243 (75%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||||||||| ||||||||||| ||||| ||||||||||| || |||||||| Sbjct 209 CGTGATAACATCCAAGGTATCACCAAGCCGGCTATTCGTCGTCTGGCGCGACGTGGTGGT 268 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| ||||||| || | || ||||| | ||| | ||| | ||| | || || Sbjct 269 GTAAAGCGTATCTCTGGTCTGATTTACGAAGAAACTCGAGGTGTACTCAAGGTATTTCTT 328 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| || | ||||||| || || ||||| || || || | ||||||||||| Sbjct 329 GAGAACGTGATTCGTGATGCTGTCACGTACACCGAACATGCCAAGAGGAAGACTGTCACT 388 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 ||||||| | ||||| || ||||||||||||| | | | || ||||| || || Sbjct 389 GCCATGGACGTTGTCTACGCTCTGAAACGTCAAGGAAGAACCTTGTACGGTTTCGGTGGT 448 Query 16697 TAA 16699 ||| Sbjct 449 TAA 451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79062287242239